RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ASB8Q9H765 288 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 SMOXQ9NWM0 555 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 SLC24A2Q9UI40 661 aa13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 FARSAQ9Y285 508 aaKnown RBP13.06□□□□□ -0.32
POLR2J3-219ENST00000608621 CLEC18AA5D8T8 446 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 ANXA9O76027 345 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 SRP72O76094 671 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 PRAMEF1O95521 474 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 PDGFAP04085 211 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 PTPN4P29074 926 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 ARCN1P48444 511 aaKnown RBP13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 TUBB4BP68371 445 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 XIAPP98170 497 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 PDE1BQ01064 536 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 TBX2Q13207 712 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 OLIG2Q13516 323 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 TUBB2AQ13885 445 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 TAF1AQ15573 450 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 GPR19Q15760 415 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 UGT8Q16880 541 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 TMTC4Q5T4D3 741 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 ARMC6Q6NXE6 501 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 CLEC18BQ6UXF7 455 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 RANBP10Q6VN20 620 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 BBS12Q6ZW61 710 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 TMEM126BQ8IUX1 230 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 CNGA4Q8IV77 575 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 CFAP206Q8IYR0 622 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 CLEC18CQ8NCF0 446 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 OR4E2Q8NGC2 313 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 MR1Q95460 341 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 ZNF501Q96CX3 271 aaPredicted RBP13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 PPM1MQ96MI6 270 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 APOL2Q9BQE5 337 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 GORASP1Q9BQQ3 440 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 TUBB2BQ9BVA1 445 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 GBA3Q9H227 469 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 FKBPLQ9UIM3 349 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 TFR2Q9UP52 801 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 COLEC10Q9Y6Z7 277 aa13.05□□□□□ -0.32
POLR2J3-219ENST00000608621 LRRK2Q5S007 2527 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 C5orf60A6NFR6 353 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 APOC4-APOC2K7ER74 178 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 DDX3YO15523 660 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 SGTAO43765 313 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 SCRG1O75711 98 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 ZBTB11O95625 1053 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 APOC2P02655 101 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 POLR2CP19387 275 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 PTMSP20962 102 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 ADRA1AP35348 466 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 CD97P48960 835 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 CCL11P51671 97 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 KPNA2P52292 529 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 GPS2Q13227 327 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 KRT33BQ14525 404 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 BCL7AQ4VC05 210 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 CCDC181Q5TID7 509 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 CAPRIN2Q6IMN6 1127 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 DAAM2Q86T65 1068 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 SYVN1Q86TM6 617 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 ATCAYQ86WG3 371 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 LILRA3Q8N6C8 439 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 SLC38A9Q8NBW4 561 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 OR13C4Q8NGS5 318 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 THAP4Q8WY91 577 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 SEC14L1Q92503 715 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 KRT35Q92764 455 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 DCUN1D1Q96GG9 259 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 RBM41Q96IZ5 413 aaKnown RBP13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 LINC00615Q96LM1 132 aaPredicted RBP13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 RMDN2Q96LZ7 410 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 KIR3DX1Q9H7L2 352 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 SOHLH2Q9NX45 425 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 SPTBP11277 2137 aa13.04□□□□□ -0.32
POLR2J3-219ENST00000608621 TNRC6AQ8NDV7 1962 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 MED13Q9UHV7 2174 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 KLHL33A6NCF5 533 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 ARGFXA6NJG6 315 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 SLC9B1P1A6NJY1 282 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 AGAP14A8MT82 685 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 CPNE3O75131 537 aaKnown RBP13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 KLK3P07288 261 aaPredicted RBP13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 SLC35G4P0C7Q5 338 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 PYGMP11217 842 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 CDH3P22223 829 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 NDUFS1P28331 727 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 TMPRSS15P98073 1019 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 CHAF1BQ13112 559 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 MSLNQ13421 630 aaPredicted RBP13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 LAMB3Q13751 1172 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 PRPSAP1Q14558 356 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 ANKRD20A2Q5SQ80 823 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 ANKRD20A1Q5TYW2 823 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 PRAMEF17Q5VTA0 474 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 ANKRD20A3Q5VUR7 823 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 ITPRIPL1Q6GPH6 555 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 LCN10Q6JVE6 187 aa13.03□□□□□ -0.32
POLR2J3-219ENST00000608621 FAM26EQ8N5C1 309 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms