RNA–Protein interactions for RNA: ENST00000606602.1

SNX5-219, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-219ENST00000606602 ZFPM2Q8WW38 1151 aa23.74■■□□□ 1.39
SNX5-219ENST00000606602 AKIRIN1Q9H9L7 192 aaPredicted RBP23.74■■□□□ 1.39
SNX5-219ENST00000606602 SLC24A2Q9UI40 661 aa23.74■■□□□ 1.39
SNX5-219ENST00000606602 PCDHA13Q9Y5I0 950 aa23.74■■□□□ 1.39
SNX5-219ENST00000606602 MACROD2A1Z1Q3 448 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 KLHL33A6NCF5 533 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 C5orf60A6NFR6 353 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 POLBP06746 335 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 PMS2P54278 862 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 OLIG2Q13516 323 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 UBAP2LQ14157 1087 aaKnown RBP23.73■■□□□ 1.39
SNX5-219ENST00000606602 KRT33BQ14525 404 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 GSE1Q14687 1217 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 SPA17Q15506 151 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 BCL7AQ4VC05 210 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 RANBP10Q6VN20 620 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 ASB18Q6ZVZ8 466 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 D2HGDHQ8N465 521 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 TC2NQ8N9U0 490 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 DCUN1D1Q96GG9 259 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 RUFY1Q96T51 708 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 GPR87Q9BY21 358 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 KIR3DX1Q9H7L2 352 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 TLK1Q9UKI8 766 aa23.73■■□□□ 1.39
SNX5-219ENST00000606602 AAR2Q9Y312 384 aaKnown RBP23.73■■□□□ 1.39
SNX5-219ENST00000606602 LCA5LO95447 670 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 ZBTB11O95625 1053 aaPredicted RBP23.72■■□□□ 1.39
SNX5-219ENST00000606602 ADRA1AP35348 466 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 ARCN1P48444 511 aaKnown RBP23.72■■□□□ 1.39
SNX5-219ENST00000606602 TUBB4BP68371 445 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 PDE1BQ01064 536 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 TUBB2AQ13885 445 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 PRPSAP1Q14558 356 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 GPR19Q15760 415 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 TMTC4Q5T4D3 741 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 CFAP206Q8IYR0 622 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 ACTL9Q8TC94 416 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 TUBB2BQ9BVA1 445 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 CRLS1Q9UJA2 301 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 PLAAQ9Y263 795 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 COLEC10Q9Y6Z7 277 aa23.72■■□□□ 1.39
SNX5-219ENST00000606602 CPNE3O75131 537 aaKnown RBP23.71■■□□□ 1.39
SNX5-219ENST00000606602 SCRG1O75711 98 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 STK10O94804 968 aaKnown RBP23.71■■□□□ 1.39
SNX5-219ENST00000606602 PYGMP11217 842 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 RALBP11234 206 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 PSMB4P28070 264 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 PTPN4P29074 926 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 COPS2P61201 443 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 RPS18P62269 152 aaKnown RBP23.71■■□□□ 1.39
SNX5-219ENST00000606602 RPS15P62841 145 aaKnown RBP23.71■■□□□ 1.39
SNX5-219ENST00000606602 XIAPP98170 497 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 OTUD4Q01804 1114 aaKnown RBP23.71■■□□□ 1.39
SNX5-219ENST00000606602 ANKRD20A2Q5SQ80 823 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 ANKRD20A1Q5TYW2 823 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 ANKRD20A3Q5VUR7 823 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 TMEM126BQ8IUX1 230 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 CDKL3Q8IVW4 592 aaPredicted RBP23.71■■□□□ 1.39
SNX5-219ENST00000606602 CCDC170Q8IYT3 715 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 SEC14L1Q92503 715 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 LINC00615Q96LM1 132 aaPredicted RBP23.71■■□□□ 1.39
SNX5-219ENST00000606602 RMDN2Q96LZ7 410 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 LUC7LQ9NQ29 371 aaKnown RBP23.71■■□□□ 1.39
SNX5-219ENST00000606602 KCND1Q9NSA2 647 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 SOHLH2Q9NX45 425 aa23.71■■□□□ 1.39
SNX5-219ENST00000606602 SGTAO43765 313 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 CRTAMO95727 393 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 CTNNA2P26232 953 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 KPNA2P52292 529 aaKnown RBP23.7■■□□□ 1.38
SNX5-219ENST00000606602 EIF3EP60228 445 aaKnown RBP23.7■■□□□ 1.38
SNX5-219ENST00000606602 TMPRSS15P98073 1019 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 SRSF1Q07955 248 aaKnown RBP eCLIP23.7■■□□□ 1.387e-16■■■□□ 14.7
SNX5-219ENST00000606602 CAPRIN2Q6IMN6 1127 aaKnown RBP23.7■■□□□ 1.38
SNX5-219ENST00000606602 FBXO38Q6PIJ6 1188 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 APLFQ8IW19 511 aaPredicted RBP23.7■■□□□ 1.38
SNX5-219ENST00000606602 LILRA3Q8N6C8 439 aaPredicted RBP23.7■■□□□ 1.38
SNX5-219ENST00000606602 OR4E2Q8NGC2 313 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 OR13C4Q8NGS5 318 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 OR8K5Q8NH50 307 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 MR1Q95460 341 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 ULK4Q96C45 1275 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 ZNF501Q96CX3 271 aaPredicted RBP23.7■■□□□ 1.38
SNX5-219ENST00000606602 PPM1MQ96MI6 270 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 FAM96AQ9H5X1 160 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 ANKMY1Q9P2S6 941 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 PTPN13Q12923 2485 aa23.7■■□□□ 1.38
SNX5-219ENST00000606602 KCNN4O15554 427 aa23.69■■□□□ 1.38
SNX5-219ENST00000606602 DNAJB5O75953 348 aa23.69■■□□□ 1.38
SNX5-219ENST00000606602 RBP3P10745 1247 aa23.69■■□□□ 1.38
SNX5-219ENST00000606602 POLR2CP19387 275 aaPredicted RBP23.69■■□□□ 1.38
SNX5-219ENST00000606602 NDUFS1P28331 727 aa23.69■■□□□ 1.38
SNX5-219ENST00000606602 CTNNA1P35221 906 aaKnown RBP23.69■■□□□ 1.38
SNX5-219ENST00000606602 PRKAA1Q13131 559 aa23.69■■□□□ 1.38
SNX5-219ENST00000606602 SEMA5AQ13591 1074 aa23.69■■□□□ 1.38
SNX5-219ENST00000606602 UGT8Q16880 541 aa23.69■■□□□ 1.38
SNX5-219ENST00000606602 DARS2Q6PI48 645 aaKnown RBP23.69■■□□□ 1.38
SNX5-219ENST00000606602 SYVN1Q86TM6 617 aa23.69■■□□□ 1.38
SNX5-219ENST00000606602 CARFQ8N187 725 aa23.69■■□□□ 1.38
SNX5-219ENST00000606602 HM13Q8TCT9 377 aa23.69■■□□□ 1.38
SNX5-219ENST00000606602 COPS8Q99627 209 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms