RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 C2orf69Q8N8R5 385 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 FBXL13Q8NEE6 735 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR7A2PQ8NGA2 310 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR13J1Q8NGT2 312 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZFAND1Q8TCF1 268 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 MAPK15Q8TD08 544 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEPT1Q8WYJ6 367 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 JDP2Q8WYK2 163 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 FIG4Q92562 907 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PIK3R3Q92569 461 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 RPL3LQ92901 407 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 KAT5Q92993 513 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CIDECQ96AQ7 238 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 LENG9Q96B70 501 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 COA7Q96BR5 231 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 OR52B2Q96RD2 323 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF300Q96RE9 604 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 APBA2Q99767 749 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 NTPCRQ9BSD7 190 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CCDC32Q9BV29 185 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLC25A23Q9BV35 468 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CHID1Q9BWS9 393 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TEX13BQ9BXU2 312 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF717Q9BY31 904 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 RHOBTB2Q9BYZ6 727 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLIRPQ9GZT3 109 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 IL22Q9GZX6 179 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SEMA6AQ9H2E6 1030 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 DSN1Q9H410 356 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 NIPAL2Q9H841 368 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 JMJD4Q9H9V9 463 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 RSAD1Q9HA92 442 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF556Q9HAH1 456 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 BARX1Q9HBU1 254 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZFP14Q9HCL3 533 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SPAG4Q9NPE6 437 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCDH12Q9NPG4 1184 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 GPRC5CQ9NQ84 441 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TLR9Q9NR96 1032 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMEM45AQ9NWC5 275 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 OXSMQ9NWU1 459 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 MRPL39Q9NYK5 338 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TAS2R7Q9NYW3 318 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ABCD2Q9UBJ2 740 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CHORDC1Q9UHD1 332 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 ZNF229Q9UJW7 825 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 USP22Q9UPT9 525 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 TMA7Q9Y2S6 64 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 AP3M1Q9Y2T2 418 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 CAB39Q9Y376 341 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 PCDHGB3Q9Y5G1 929 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 HS3ST3A1Q9Y663 406 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 COPG1Q9Y678 874 aaKnown RBP4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 HSPE1-MOB4S4R3N1 261 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 SLIT2O94813 1529 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 DOT1LQ8TEK3 1739 aa4.03□□□□□ -1.76
HMGB1P50-201ENST00000605814 FOCADQ5VW36 1801 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 RNF103-CHMP3A0A140T963 221 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 DHRS12A0PJE2 317 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 TYW5A2RUC4 315 aaKnown RBP4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRORSD1PA6NEY8 169 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 METTL15A6NJ78 407 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 A8MU76 341 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 PDZK1P1A8MUH7 402 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 LEUTXA8MZ59 168 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 H0Y626 953 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 H3BMM5 538 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 GOLGA8SH3BPF8 625 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 MEIS2O14770 477 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 TNPO2O14787 897 aaKnown RBP4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLC16A6O15403 523 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 CFLARO15519 480 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 ARHGEF9O43307 516 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 CA12O43570 354 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 SGTAO43765 313 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 PRPSAP2O60256 369 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 NRP2O60462 931 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 B4GALT3O60512 393 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 CST8O60676 142 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZMPSTE24O75844 475 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 TRIM16O95361 564 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 LYPLA2O95372 231 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 SEC24AO95486 1093 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 HSPA4LO95757 839 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 IFNB1P01574 187 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 CD4P01730 458 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 SLPIP03973 132 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 ALDOAP04075 364 aaKnown RBP4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 IFNA16P05015 189 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 SNRPB2P08579 225 aaKnown RBP4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 CSH1P0DML2 217 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 CSH2P0DML3 217 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 GFAPP14136 432 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 ZNF30P17039 623 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 DDX5P17844 614 aaKnown RBP4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 NELFEP18615 380 aaKnown RBP4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 CYP3A5P20815 502 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 CYP2A7P20853 494 aa4.02□□□□□ -1.77
HMGB1P50-201ENST00000605814 CHMP24386 653 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms