RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 COPS8Q99627 209 aa10.42□□□□□ -0.74
TUBE1-210ENST00000604967 FERMT1Q9BQL6 677 aa10.42□□□□□ -0.74
TUBE1-210ENST00000604967 COG4Q9H9E3 785 aa10.42□□□□□ -0.74
TUBE1-210ENST00000604967 CHRAC1Q9NRG0 131 aa10.42□□□□□ -0.74
TUBE1-210ENST00000604967 TREX1Q9NSU2 369 aa10.42□□□□□ -0.74
TUBE1-210ENST00000604967 IMP3Q9NV31 184 aaKnown RBP10.42□□□□□ -0.74
TUBE1-210ENST00000604967 SLC39A1Q9NY26 324 aa10.42□□□□□ -0.74
TUBE1-210ENST00000604967 SEMA5BQ9P283 1151 aa10.42□□□□□ -0.74
TUBE1-210ENST00000604967 SLC24A2Q9UI40 661 aa10.42□□□□□ -0.74
TUBE1-210ENST00000604967 PILRAQ9UKJ1 303 aa10.42□□□□□ -0.74
TUBE1-210ENST00000604967 TTC7AQ9ULT0 858 aaPredicted RBP10.42□□□□□ -0.74
TUBE1-210ENST00000604967 ERI2A8K979 691 aaKnown RBP10.41□□□□□ -0.74
TUBE1-210ENST00000604967 BHMG1C9JSJ3 638 aaPredicted RBP10.41□□□□□ -0.74
TUBE1-210ENST00000604967 ZNF185O15231 689 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 KCNJ13O60928 360 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 TMEM63AO94886 807 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 LIPCP11150 499 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 SLC2A4P14672 509 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 FOLR1P15328 257 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 CSTF2P33240 577 aaKnown RBP eCLIP10.41□□□□□ -0.74
TUBE1-210ENST00000604967 HADHAP40939 763 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 SEPHS1P49903 392 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 TMPRSS3P57727 454 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 PDE1BQ01064 536 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 CACNG1Q06432 222 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 KCNJ11Q14654 390 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 GPR33Q49SQ1 333 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 VRK3Q8IV63 474 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 TRIM48Q8IWZ4 208 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 LMNTD1Q8N9Z9 388 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 PHC3Q8NDX5 983 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 HM13Q8TCT9 377 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 KLHL6Q8WZ60 621 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 ULK4Q96C45 1275 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 PDLIM2Q96JY6 352 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 ZNF514Q96K75 400 aaPredicted RBP10.41□□□□□ -0.74
TUBE1-210ENST00000604967 C12orf66Q96MD2 445 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 ALS2CR12Q96Q35 445 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 CCNL2Q96S94 520 aaPredicted RBP10.41□□□□□ -0.74
TUBE1-210ENST00000604967 DPYSL5Q9BPU6 564 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 DDA1Q9BW61 102 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 AP1M1Q9BXS5 423 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.41□□□□□ -0.74
TUBE1-210ENST00000604967 ZCCHC2Q9C0B9 1178 aaKnown RBP10.41□□□□□ -0.74
TUBE1-210ENST00000604967 B3GNT4Q9C0J1 378 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 AKIRIN1Q9H9L7 192 aaPredicted RBP10.41□□□□□ -0.74
TUBE1-210ENST00000604967 TRMT1Q9NXH9 659 aaKnown RBP10.41□□□□□ -0.74
TUBE1-210ENST00000604967 PAK5Q9P286 719 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 EPHA6Q9UF33 1036 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 PYCARDQ9ULZ3 195 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 CDYLQ9Y232 598 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 TCAF1Q9Y4C2 921 aa10.41□□□□□ -0.74
TUBE1-210ENST00000604967 SPENQ96T58 3664 aaKnown RBP10.41□□□□□ -0.74
TUBE1-210ENST00000604967 LOC101059948A0A1B0GTJ6 334 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 SLC5A10A0PJK1 596 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 OR5K3A6NET4 321 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 IQCF5A8MTL0 148 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 BTN3A3O00478 584 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 ATXN7O15265 892 aaPredicted RBP10.4□□□□□ -0.74
TUBE1-210ENST00000604967 PSMD3O43242 534 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 DLGAP3O95886 979 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 LIFP15018 202 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 VCLP18206 1134 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 F8A1P23610 371 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 ADRA1DP25100 572 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 MGAT1P26572 445 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 ACADLP28330 430 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 MAGEA6P43360 314 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 VPS41P49754 854 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 KPNA2P52292 529 aaKnown RBP10.4□□□□□ -0.74
TUBE1-210ENST00000604967 SESN2P58004 480 aaPredicted RBP10.4□□□□□ -0.74
TUBE1-210ENST00000604967 COL9A2Q14055 689 aaPredicted RBP10.4□□□□□ -0.74
TUBE1-210ENST00000604967 BRD3Q15059 726 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 CYP1B1Q16678 543 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 LINC00303Q3SY05 128 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 IRGCQ6NXR0 463 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 PACS1Q6VY07 963 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 PRSS42Q7Z5A4 293 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 LINC00523Q86TU6 105 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 CAND1Q86VP6 1230 aaKnown RBP10.4□□□□□ -0.74
TUBE1-210ENST00000604967 UNC5BQ8IZJ1 945 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 CCDC89Q8N998 374 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 DNAAF3Q8N9W5 541 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 SLC41A2Q96JW4 573 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 MAP3K3Q99759 626 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 CCM2Q9BSQ5 444 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 TWSG1Q9GZX9 223 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 ZNF768Q9H5H4 540 aaKnown RBP10.4□□□□□ -0.74
TUBE1-210ENST00000604967 KIR3DX1Q9H7L2 352 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 EIF2B3Q9NR50 452 aaKnown RBP10.4□□□□□ -0.74
TUBE1-210ENST00000604967 FBXO8Q9NRD0 319 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 SYBUQ9NX95 663 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 ACSL5Q9ULC5 683 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 RIMKLBQ9ULI2 386 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 ZKSCAN5Q9Y2L8 839 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 PCDHGA4Q9Y5G9 962 aa10.4□□□□□ -0.74
TUBE1-210ENST00000604967 FASNP49327 2511 aaKnown RBP10.4□□□□□ -0.75
TUBE1-210ENST00000604967 PIKFYVEQ9Y2I7 2098 aa10.4□□□□□ -0.75
TUBE1-210ENST00000604967 C17orf113A0A1B0GUU1 675 aa10.39□□□□□ -0.75
TUBE1-210ENST00000604967 KRT87PA6NCN2 255 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms