RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 EIF3BP55884 814 aaKnown RBP9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 UBE2IP63279 158 aaKnown RBP9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 NFE2L1Q14494 772 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 GBX1Q14549 363 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 TRADDQ15628 312 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 PLA2G4EQ3MJ16 856 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 TEDDM1Q5T9Z0 273 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 FAM45BPQ6NSW5 357 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 UNC5DQ6UXZ4 953 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 C3orf62Q6ZUJ4 267 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 NEK10Q6ZWH5 1172 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 DET1Q7L5Y6 550 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 OTOAQ7RTW8 1153 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CCDC91Q7Z6B0 441 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 PDZD3Q86UT5 571 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 DENND6AQ8IWF6 608 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 SLC22A15Q8IZD6 547 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 PHC3Q8NDX5 983 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 DEFB124Q8NES8 71 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 FAM45AQ8TCE6 357 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 ELMO1Q92556 727 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 UBXN4Q92575 508 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 GRAMD1AQ96CP6 724 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 PWWP2AQ96N64 755 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CYTH2Q99418 400 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CPNE1Q99829 537 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 RHOXF2Q9BQY4 288 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 MCMBPQ9BTE3 642 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 OR52A5Q9H2C5 316 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CDC42EP4Q9H3Q1 356 aaKnown RBP9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 PPCSQ9HAB8 311 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 POPDC3Q9HBV1 291 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 LRRC4CQ9HCJ2 640 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 PPANQ9NQ55 473 aaKnown RBP9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 IARS2Q9NSE4 1012 aaKnown RBP9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 PRKAB1Q9Y478 270 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 U3KQA8 63 aa9.29□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CFAP54Q96N23 3096 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 RHPN2P1A8MT19 583 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 GOLGA8KD6RF30 607 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 GOLGA8TH3BQL2 631 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 SLCO2B1O94956 709 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 FTH1P19P0C7X4 201 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 MTHFD1P11586 935 aaKnown RBP9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 BRAFP15056 766 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 SSTR1P30872 391 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 GP5P40197 560 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 GPX6P59796 221 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 SIM1P81133 766 aaPredicted RBP9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 HHEXQ03014 270 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CTBP1Q13363 440 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 BIRC2Q13490 618 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 SQSTM1Q13501 440 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 BOP1Q14137 746 aaKnown RBP9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 KLHL38Q2WGJ6 581 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CTSL3PQ5NE16 218 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CAPRIN2Q6IMN6 1127 aaKnown RBP9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 TRMT10BQ6PF06 316 aaKnown RBP9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 ZC3HC1Q86WB0 502 aaKnown RBP9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 TRIM48Q8IWZ4 208 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 ARL14Q8N4G2 192 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 SLC37A2Q8TED4 501 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CXorf40BQ96DE9 158 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CCDC97Q96F63 343 aaPredicted RBP9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 C9orf72Q96LT7 481 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 AARSD1Q9BTE6 412 aaKnown RBP9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 RHOJQ9H4E5 214 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 ACSS3Q9H6R3 686 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 MVB12BQ9H7P6 319 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 FBXO6Q9NRD1 293 aaPredicted RBP9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 TOR4AQ9NXH8 423 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 TAS2R13Q9NYV9 303 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 CPNE7Q9UBL6 633 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 FETUBQ9UGM5 382 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 NFU1Q9UMS0 254 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 DNAJC16Q9Y2G8 782 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 PRSS21Q9Y6M0 314 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 COLEC10Q9Y6Z7 277 aa9.28□□□□□ -0.92
SQSTM1P1-201ENST00000603451 DNAH14Q0VDD8 3507 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 A0A087WUV0 522 aaPredicted RBP9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 MATN2O00339 956 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 SNX2O60749 519 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 VIPP01282 170 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 C1QAP02745 245 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 AHSGP02765 367 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 PBLDP30039 288 aaPredicted RBP9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 CCR7P32248 378 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 SPRP35270 261 aaPredicted RBP9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 CCNFP41002 786 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 RGS4P49798 205 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 CLCN7P51798 805 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 LIMK2P53671 638 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 RPE65Q16518 533 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 HP1BP3Q5SSJ5 553 aaPredicted RBP9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 GUSBP11Q6P575 273 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 EMBQ6PCB8 327 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 KLHL35Q6PF15 583 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 XKR5Q6UX68 686 aa9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 FAM83HQ6ZRV2 1179 aaPredicted RBP9.27□□□□□ -0.93
SQSTM1P1-201ENST00000603451 TAOK1Q7L7X3 1001 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms