RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 SLC35F4A4IF30 521 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 SLC25A12O75746 678 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 NR2F6P10588 404 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 RPP38P78345 283 aaKnown RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ZFPM1Q8IX07 1006 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 GPR152Q8TDT2 470 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 AP1S3Q96PC3 154 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ABHD16BQ9H3Z7 469 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 GMIPQ9P107 970 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 PHF24Q9UPV7 400 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 MYOM1P52179 1685 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 UGT2B17O75795 530 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ATXN7L3Q14CW9 347 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 DPP7Q9UHL4 492 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 SLC27A5Q9Y2P5 690 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 GTPBP1O00178 669 aaKnown RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ERN1O75460 977 aaKnown RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 PLCZ1Q86YW0 608 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ADGRG2Q8IZP9 1017 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 HDDC3Q8N4P3 179 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 HAS1Q92839 578 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 RAD51AP1Q96B01 352 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 PCDHAC1Q9H158 963 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 PRDM16Q9HAZ2 1276 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ASF1AQ9Y294 204 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 YDJCA8MPS7 323 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ISM1B1AKI9 464 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 IL1BP01584 269 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 CSN2P05814 226 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 F8A1P23610 371 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ACTR3P61158 418 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 FMO1Q01740 532 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF829Q3KNS6 432 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 GPR153Q6NV75 609 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 SLC2A7Q6PXP3 512 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 FAM98AQ8NCA5 519 aaKnown RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 MTMR9Q96QG7 549 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 PHOX2BQ99453 314 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 MCMBPQ9BTE3 642 aa8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF471Q9BX82 626 aaPredicted RBP8.6□□□□□ -1.03
CSMD1-216ENST00000602557 ABHD14A-ACY1A0A1B0GW23 586 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 MNDAP41218 407 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 MRPS6P82932 125 aaKnown RBP8.59□□□□□ -1.03
CSMD1-216ENST00000602557 DNAJA4Q8WW22 397 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-216ENST00000602557 IDI2Q9BXS1 227 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 DNTTP04053 509 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 UQCRC1P31930 480 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 PPM1JQ5JR12 505 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 BBS12Q6ZW61 710 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF557Q8N988 423 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-216ENST00000602557 CXorf40BQ96DE9 158 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 SLC30A2Q9BRI3 323 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 ZYG11BQ9C0D3 744 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 EBF1Q9UH73 591 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 L7N2F9 121 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 MSI1O43347 362 aaKnown RBP8.59□□□□□ -1.03
CSMD1-216ENST00000602557 FARS2O95363 451 aaKnown RBP8.59□□□□□ -1.03
CSMD1-216ENST00000602557 FCER2P06734 321 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 RPL3P39023 403 aaKnown RBP8.59□□□□□ -1.03
CSMD1-216ENST00000602557 MTFR2Q6P444 385 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 ZSCAN1Q8NBB4 408 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 PTCD2Q8WV60 388 aaKnown RBP8.59□□□□□ -1.03
CSMD1-216ENST00000602557 PPIL3Q9H2H8 161 aaKnown RBP8.59□□□□□ -1.03
CSMD1-216ENST00000602557 AASSQ9UDR5 926 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 SH3PXD2BA1X283 911 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 BTNL10A8MVZ5 291 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 MAP2K4P45985 399 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 IL17AQ16552 155 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 VMACQ2NL98 169 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 DPY19L3Q6ZPD9 716 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 TMEM203Q969S6 136 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 CORO1BQ9BR76 489 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 TAS2R3Q9NYW6 316 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 ADM5C9JUS6 153 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 CLDN5O00501 218 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 NAT1P18440 290 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 GADD45AP24522 165 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 LRRN1Q6UXK5 716 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 SERPINA13PQ6UXR4 307 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 MOB2Q70IA6 237 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 RIOX2Q8IUF8 465 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 FOXRED2Q8IWF2 684 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 PCDH19Q8TAB3 1148 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 FUZQ9BT04 418 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 EXO5Q9H790 373 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 EQTNQ9NQ60 294 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 MAB21L2Q9Y586 359 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 WNT10BO00744 389 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 DFNA5O60443 496 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 DNAJA2O60884 412 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 POU2F1P14859 743 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 CRHR1P34998 444 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 ALG11Q2TAA5 492 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 RHBDF2Q6PJF5 856 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 XKRXQ6PP77 449 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 PIAS4Q8N2W9 510 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-216ENST00000602557 TMEM161BQ8NDZ6 487 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 ZNF354BQ96LW1 612 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 PCDHGC3Q9UN70 934 aa8.59□□□□□ -1.03
CSMD1-216ENST00000602557 C1orf196B1AJZ1 125 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms