RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 GSDMCQ9BYG8 508 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 ACBD3Q9H3P7 528 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 DPEP2Q9H4A9 486 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 SYTL2Q9HCH5 934 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 GPAMQ9HCL2 828 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 SPASTQ9UBP0 616 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 ACSL5Q9ULC5 683 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 CDYLQ9Y232 598 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 PLEKHM1Q9Y4G2 1056 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 ST14Q9Y5Y6 855 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 PCDH15Q96QU1 1955 aa14.08□□□□□ -0.16
UPF1-211ENST00000600868 A0A087X1B8 175 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 A0A096LPK6 155 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 A0A1B0GTQ1 180 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 SCAMP1O15126 338 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 YKT6O15498 198 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 PHGDHO43175 533 aaKnown RBP14.07□□□□□ -0.16
UPF1-211ENST00000600868 PIAS2O75928 621 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 LMNAP02545 664 aaKnown RBP14.07□□□□□ -0.16
UPF1-211ENST00000600868 C2P06681 752 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 ZNF806P0C7X5 589 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 SLC35E2BP0CK96 405 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 ENO3P13929 434 aaPredicted RBP14.07□□□□□ -0.16
UPF1-211ENST00000600868 ZNF37AP17032 561 aaPredicted RBP14.07□□□□□ -0.16
UPF1-211ENST00000600868 DGKAP23743 735 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 SLC26A3P40879 764 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 ARRB1P49407 418 aaPredicted RBP14.07□□□□□ -0.16
UPF1-211ENST00000600868 PGGT1BP53609 377 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 IRX4P78413 519 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 HSPA14Q0VDF9 509 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 ZNF460Q14592 562 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 ELOCQ15369 112 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 HLA-BQ31612 363 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 SYTL3Q4VX76 610 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 TAF1BQ53T94 588 aaPredicted RBP14.07□□□□□ -0.16
UPF1-211ENST00000600868 TNFAIP8L3Q5GJ75 292 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 PRAMEF14Q5SWL7 426 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 TMEM207Q6UWW9 146 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 WASH2PQ6VEQ5 465 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 NAPRTQ6XQN6 538 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 NEK10Q6ZWH5 1172 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 RAPH1Q70E73 1250 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 TRABD2AQ86V40 505 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 NKAPQ8N5F7 415 aaKnown RBP14.07□□□□□ -0.16
UPF1-211ENST00000600868 LILRA3Q8N6C8 439 aaPredicted RBP14.07□□□□□ -0.16
UPF1-211ENST00000600868 CCL4L1Q8NHW4 92 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 GLMNQ92990 594 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 PDLIM5Q96HC4 596 aaKnown RBP14.07□□□□□ -0.16
UPF1-211ENST00000600868 SH3GL2Q99962 352 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 TMBIM4Q9HC24 238 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 WASH6PQ9NQA3 447 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 FAM86C1Q9NVL1 165 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 TLK1Q9UKI8 766 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 KCNK6Q9Y257 313 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 DNAJC16Q9Y2G8 782 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 ACOT9Q9Y305 439 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 HCN4Q9Y3Q4 1203 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 CSNK1G3Q9Y6M4 447 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 KNL1Q8NG31 2342 aa14.07□□□□□ -0.16
UPF1-211ENST00000600868 A0A1W2PPM1 405 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 OPA1O60313 960 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 LRP3O75074 770 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 CER1O95813 267 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 IDSP22304 550 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 AK4P27144 223 aaPredicted RBP14.06□□□□□ -0.16
UPF1-211ENST00000600868 ACTR1BP42025 376 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 RGS4P49798 205 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 IL2P60568 153 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 ACTR1AP61163 376 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 SHBQ15464 509 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 CCDC6Q16204 474 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 ACSBG2Q5FVE4 666 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 AGAP9Q5VTM2 703 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 LRRC8EQ6NSJ5 796 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 SH2D5Q6ZV89 423 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 TAF8Q7Z7C8 310 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 GKN2Q86XP6 184 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 CPNE9Q8IYJ1 553 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 SLC22A15Q8IZD6 547 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 ZNF548Q8NEK5 533 aaPredicted RBP14.06□□□□□ -0.16
UPF1-211ENST00000600868 UBXN10Q96LJ8 280 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 STMN4Q9H169 189 aaPredicted RBP14.06□□□□□ -0.16
UPF1-211ENST00000600868 OR52A5Q9H2C5 316 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 CENPHQ9H3R5 247 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 OSGEPL1Q9H4B0 414 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 CAAP1Q9H8G2 361 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 FSCN3Q9NQT6 498 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 SENP1Q9P0U3 644 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 FAM8A1Q9UBU6 413 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 PCOLCE2Q9UKZ9 415 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 TMEM131Q92545 1883 aa14.06□□□□□ -0.16
UPF1-211ENST00000600868 PROB1E7EW31 1015 aa14.05□□□□□ -0.16
UPF1-211ENST00000600868 LMO7DNF2Z398 122 aa14.05□□□□□ -0.16
UPF1-211ENST00000600868 AQP9O43315 295 aa14.05□□□□□ -0.16
UPF1-211ENST00000600868 TSPAN12O95859 305 aa14.05□□□□□ -0.16
UPF1-211ENST00000600868 CELA2BP08218 269 aaPredicted RBP14.05□□□□□ -0.16
UPF1-211ENST00000600868 CCDC166P0CW27 439 aa14.05□□□□□ -0.16
UPF1-211ENST00000600868 MPC1LP0DKB6 136 aa14.05□□□□□ -0.16
UPF1-211ENST00000600868 COL6A2P12110 1019 aa14.05□□□□□ -0.16
UPF1-211ENST00000600868 ENGP17813 658 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms