RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 ACSL5Q9ULC5 683 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 PSMD13Q9UNM6 376 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 PSAT1Q9Y617 370 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 AKAP13Q12802 2813 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 KIR2DS5A0A0G2JLQ3 304 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 A0A0G2JNG1 304 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 A0A1W2PQM1 296 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 CXorf49A8MYA2 514 aaPredicted RBP13.45□□□□□ -0.26
VRK3-219ENST00000600137 KIR2DS3K7RE56 304 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 NTN3O00634 580 aaPredicted RBP13.45□□□□□ -0.26
VRK3-219ENST00000600137 NIPSNAP2O75323 286 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 RFPL3O75679 317 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 PIAS1O75925 651 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 TOP3BO95985 862 aaKnown RBP13.45□□□□□ -0.26
VRK3-219ENST00000600137 ESR1P03372 595 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 PKMP14618 531 aaKnown RBP13.45□□□□□ -0.26
VRK3-219ENST00000600137 VCLP18206 1134 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 ITGB6P18564 788 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 ACADLP28330 430 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 PREPP48147 710 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 EIF3BP55884 814 aaKnown RBP13.45□□□□□ -0.26
VRK3-219ENST00000600137 MGAT5Q09328 741 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 RPA4Q13156 261 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 GBX1Q14549 363 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 KIR2DS5Q14953 304 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 SEPT7Q16181 437 aaKnown RBP13.45□□□□□ -0.26
VRK3-219ENST00000600137 RPE65Q16518 533 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 RNF187Q5TA31 235 aaPredicted RBP13.45□□□□□ -0.26
VRK3-219ENST00000600137 C3orf62Q6ZUJ4 267 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 DGLUCYQ7Z3D6 616 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 RAB44Q7Z6P3 723 aaPredicted RBP13.45□□□□□ -0.26
VRK3-219ENST00000600137 CCDC25Q86WR0 208 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 VRK3Q8IV63 474 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 OR6C4Q8NGE1 309 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 CCDC74AQ96AQ1 378 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 SLC30A3Q99726 388 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 CCDC3Q9BQI4 270 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 FAM167BQ9BTA0 163 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 WWP1Q9H0M0 922 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 ANKZF1Q9H8Y5 726 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 SLC40A1Q9NP59 571 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 CPNE7Q9UBL6 633 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 FAM8A1Q9UBU6 413 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 NFU1Q9UMS0 254 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 PCDHB1Q9Y5F3 818 aa13.45□□□□□ -0.26
VRK3-219ENST00000600137 TCRBV9S1A1TA0A576 114 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 UBA6A0AVT1 1052 aaPredicted RBP13.44□□□□□ -0.26
VRK3-219ENST00000600137 FAM159BA6NKW6 160 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 PDZK1P1A8MUH7 402 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 LIN7AO14910 233 aaPredicted RBP13.44□□□□□ -0.26
VRK3-219ENST00000600137 OPA1O60313 960 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 SLCO2B1O94956 709 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 TRIM16O95361 564 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 FTH1P02794 183 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 GSTA2P09210 222 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 FAM153BP0C7A2 387 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 MYBL2P10244 700 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 CLCN7P51798 805 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 CLDN6P56747 220 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 INSM1Q01101 510 aaPredicted RBP13.44□□□□□ -0.26
VRK3-219ENST00000600137 CFHR1Q03591 330 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 CUL1Q13616 776 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 KYNUQ16719 465 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 FAM153CQ494X1 144 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 CDCP2Q5VXM1 449 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 DHRS13Q6UX07 377 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 KIAA0408Q6ZU52 694 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 PALM2Q8IXS6 379 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 IFT20Q8IY31 132 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 OTUD6BQ8N6M0 293 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 MAPK15Q8TD08 544 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 ELMO1Q92556 727 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 NAT6Q93015 286 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 AARSD1Q9BTE6 412 aaKnown RBP13.44□□□□□ -0.26
VRK3-219ENST00000600137 FUT8Q9BYC5 575 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 TXLNGYQ9BZA5 131 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 NINJ2Q9NZG7 142 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 GNPTGQ9UJJ9 305 aa13.44□□□□□ -0.26
VRK3-219ENST00000600137 APOBEC2Q9Y235 224 aaKnown RBP13.44□□□□□ -0.26
VRK3-219ENST00000600137 CD1CP29017 333 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 ABCG1P45844 678 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 CD151P48509 253 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 OR1D5P58170 312 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 CCL7P80098 99 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 HHEXQ03014 270 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 SQSTM1Q13501 440 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 BRD3Q15059 726 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 TEX35Q5T0J7 233 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 RBM20Q5T481 1227 aaKnown RBP13.43□□□□□ -0.26
VRK3-219ENST00000600137 PTRHD1Q6GMV3 140 aaKnown RBP13.43□□□□□ -0.26
VRK3-219ENST00000600137 ZNF449Q6P9G9 518 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 CAPN12Q6ZSI9 719 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 TMPRSS9Q7Z410 1059 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 SPRED1Q7Z699 444 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 SLC9B2Q86UD5 537 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 ZNF761Q86XN6 746 aaPredicted RBP13.43□□□□□ -0.26
VRK3-219ENST00000600137 CHCHD4Q8N4Q1 142 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 ACVR1CQ8NER5 493 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 GIMAP7Q8NHV1 300 aa13.43□□□□□ -0.26
VRK3-219ENST00000600137 FMO2Q99518 471 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms