RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 KIAA1324Q6UXG2 1013 aaKnown RBP10.33□□□□□ -0.76
SMG9-207ENST00000598860 SLC36A4Q6YBV0 504 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 USP45Q70EL2 814 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 CENPUQ71F23 418 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 CAMK1DQ8IU85 385 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 RBM12BQ8IXT5 1001 aaKnown RBP10.33□□□□□ -0.76
SMG9-207ENST00000598860 FRMD1Q8N878 549 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 DNAAF3Q8N9W5 541 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 ZNF610Q8N9Z0 462 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 LPCAT1Q8NF37 534 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 FBXO25Q8TCJ0 367 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 PHOSPHO1Q8TCT1 267 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 IFT81Q8WYA0 676 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 RAB7BQ96AH8 199 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 RMDN1Q96DB5 314 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 MRGPRX1Q96LB2 322 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 KLHL32Q96NJ5 620 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 SERPINB12Q96P63 405 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 DIRC2Q96SL1 478 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 FMO2Q99518 471 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 IL22Q9GZX6 179 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 MS4A5Q9H3V2 200 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 CD248Q9HCU0 757 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 MBD1Q9UIS9 605 aaPredicted RBP10.33□□□□□ -0.76
SMG9-207ENST00000598860 RAB21Q9UL25 225 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 CHKBQ9Y259 395 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 PPIL1Q9Y3C6 166 aa10.33□□□□□ -0.76
SMG9-207ENST00000598860 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.33□□□□□ -0.76
SMG9-207ENST00000598860 PIKFYVEQ9Y2I7 2098 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 A0A0J9YYE9 177 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 TCRBV7S3A2A0A539 114 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 ANKRD66B4E2M5 251 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 SLC7A4O43246 635 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 GJB3O75712 270 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 PRLP01236 227 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 IL1BP01584 269 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 TRBC1P01850 177 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 DNTTP04053 509 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 CTSLP07711 333 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 ATXN1LP0C7T5 689 aaKnown RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 CYP2A6P11509 494 aaPredicted RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 PTX3P26022 381 aaPredicted RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 MPLP40238 635 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 MAGEA3P43357 314 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 PSMD8P48556 350 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 CARSP49589 748 aaKnown RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 NEK3P51956 506 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 TERF1P54274 439 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 PUM1Q14671 1186 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMG9-207ENST00000598860 SF3A2Q15428 464 aaKnown RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 SPDYCQ5MJ68 293 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 ESRP1Q6NXG1 681 aaKnown RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 USP30Q70CQ3 517 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 ZNF534Q76KX8 674 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 TMPRSS6Q8IU80 811 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 MMAAQ8IVH4 418 aaKnown RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 TMEFF1Q8IYR6 380 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 OR52K1Q8NGK4 314 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 PDCD6IPQ8WUM4 868 aaKnown RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 PIH1D2Q8WWB5 315 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 RANBP9Q96S59 729 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 LYSMD1Q96S90 227 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 C19orf43Q9BQ61 176 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 NAT9Q9BTE0 207 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 PABPC3Q9H361 631 aaKnown RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 TRABDQ9H4I3 376 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 MTG2Q9H4K7 406 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 ZDHHC18Q9NUE0 388 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 ASH2LQ9UBL3 628 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.32□□□□□ -0.76
SMG9-207ENST00000598860 V9GYY5 206 aaPredicted RBP10.32□□□□□ -0.76
SMG9-207ENST00000598860 USP34Q70CQ2 3546 aa10.32□□□□□ -0.76
SMG9-207ENST00000598860 FRYLO94915 3013 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 IGHV1OR15-9A0A0B4J2B8 117 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.31□□□□□ -0.76
SMG9-207ENST00000598860 HEATR9A2RTY3 570 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 CAPN8A6NHC0 703 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 E7ESA3 106 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 TP73O15350 636 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 NDUFS2O75306 463 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 ERLIN1O75477 346 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 AGTP01019 485 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 ZNF30P17039 623 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 ECHS1P30084 290 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 GKP32189 559 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 SLC8A1P32418 973 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 COPAP53621 1224 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 RPS14P62263 151 aaKnown RBP10.31□□□□□ -0.76
SMG9-207ENST00000598860 PDE1BQ01064 536 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 GALNT3Q14435 633 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 SPARCL1Q14515 664 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 IHHQ14623 411 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 SLMAPQ14BN4 828 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 UGP2Q16851 508 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 AASDHQ4L235 1098 aaPredicted RBP10.31□□□□□ -0.76
SMG9-207ENST00000598860 SIRPB2Q5JXA9 342 aa10.31□□□□□ -0.76
SMG9-207ENST00000598860 SYCP2LQ5T4T6 812 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms