RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-223	ENST00000598717	SYP	P08247	313 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	SLC35E2B	P0CK96	405 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	CCDC166	P0CW27	439 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	CBSL	P0DN79	551 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	ENO3	P13929	434 aa	Predicted RBP	18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	ZNF37A	P17032	561 aa	Predicted RBP	18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	KRT4	P19013	534 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	CBS	P35520	551 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	ARRB1	P49407	418 aa	Predicted RBP	18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	RPA4	Q13156	261 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	TCEA2	Q15560	299 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	PRRT3	Q5FWE3	981 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	PRAMEF14	Q5SWL7	426 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	LRRC8E	Q6NSJ5	796 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	IL27RA	Q6UWB1	636 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	FSTL5	Q8N475	847 aa	Predicted RBP	18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	SKA2	Q8WVK7	121 aa	Predicted RBP	18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	SMC6	Q96SB8	1091 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	NUSAP1	Q9BXS6	441 aa	Known RBP	18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	CAPN10	Q9HC96	672 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	GULP1	Q9UBP9	304 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	GMEB2	Q9UKD1	530 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	ACSL5	Q9ULC5	683 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	GON4L	Q3T8J9	2241 aa		18.92	■□□□□ 0.62
LTBP4-223	ENST00000598717	PATE3	B3GLJ2	98 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	EIF3F	O00303	357 aa	Predicted RBP	18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	RET	P07949	1114 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	SLC26A3	P40879	764 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	ACTR1B	P42025	376 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	PREP	P48147	710 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	CSRP3	P50461	194 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	CLCNKA	P51800	687 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	ACTR1A	P61163	376 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	BNC1	Q01954	994 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	GRIK2	Q13002	908 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	CSHL1	Q14406	222 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	ELOC	Q15369	112 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	ZNF658B	Q4V348	819 aa	Predicted RBP	18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	HSP90B2P	Q58FF3	399 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	ACSBG2	Q5FVE4	666 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	TNFAIP8L3	Q5GJ75	292 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	METRNL	Q641Q3	311 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	TMEM207	Q6UWW9	146 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	TAF8	Q7Z7C8	310 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	C4orf33	Q8N1A6	199 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	MYO1H	Q8N1T3	1032 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	LILRA3	Q8N6C8	439 aa	Predicted RBP	18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	EEF1AKMT1	Q8WVE0	214 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	GLMN	Q92990	594 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	ARL8A	Q96BM9	186 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	LINGO1	Q96FE5	620 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	ELF4	Q99607	663 aa	Predicted RBP	18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	ZDHHC5	Q9C0B5	715 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	DPEP2	Q9H4A9	486 aa		18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	TSR3	Q9UJK0	312 aa	Known RBP	18.91	■□□□□ 0.62
LTBP4-223	ENST00000598717	FANCM	Q8IYD8	2048 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	KHNYN	O15037	678 aa	Known RBP	18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	DFNA5	O60443	496 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	SNX2	O60749	519 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	SLCO2B1	O94956	709 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	WISP3	O95389	354 aa	Predicted RBP	18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	LTA4H	P09960	611 aa	Known RBP	18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	COL6A2	P12110	1019 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	AK4	P27144	223 aa	Predicted RBP	18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	CCT5	P48643	541 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	IRF9	Q00978	393 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	C1orf61	Q13536	156 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	FAM83E	Q2M2I3	478 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	SLC30A9	Q6PML9	568 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	SPNS2	Q8IVW8	549 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	SUMF1	Q8NBK3	374 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	CCL4L1	Q8NHW4	92 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	GPBAR1	Q8TDU6	330 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	LMX1A	Q8TE12	382 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	ANKRD49	Q8WVL7	239 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	ALKBH8	Q96BT7	664 aa	Known RBP	18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	ATP6V1G3	Q96LB4	118 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	UBXN10	Q96LJ8	280 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	LRRC61	Q9BV99	259 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	DCDC2	Q9UHG0	476 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	DOLK	Q9UPQ8	538 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	CDYL	Q9Y232	598 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	ACTL7B	Q9Y614	415 aa		18.9	■□□□□ 0.62
LTBP4-223	ENST00000598717	PDZK1P1	A8MUH7	402 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	ARHGAP33	O14559	1287 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	COPE	O14579	308 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	KLHL2	O95198	593 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	SLC35G4	P0C7Q5	338 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	MPC1L	P0DKB6	136 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	PDHA2	P29803	388 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	CCNF	P41002	786 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	SLC18A2	Q05940	514 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	GBX1	Q14549	363 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	SEPT7	Q16181	437 aa	Known RBP	18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	CCDC6	Q16204	474 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	ZNF423	Q2M1K9	1284 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	HLA-B	Q31612	363 aa		18.89	■□□□□ 0.61
LTBP4-223	ENST00000598717	AGAP9	Q5VTM2	703 aa		18.89	■□□□□ 0.61

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