RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	ATP5O	P48047	213 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	KPNA2	P52292	529 aa	Known RBP	10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	HADHB	P55084	474 aa	Known RBP	10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	HSD11B2	P80365	405 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	ACY1	Q03154	408 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	CHAF1B	Q13112	559 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	TBX2	Q13207	712 aa	Predicted RBP	10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	IL10RA	Q13651	578 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	PRAMEF17	Q5VTA0	474 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	CYB5D1	Q6P9G0	228 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	CLEC18B	Q6UXF7	455 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	BBS12	Q6ZW61	710 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	OOSP2	Q86WS3	158 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	KMT5C	Q86Y97	462 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	TMEM126B	Q8IUX1	230 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	CNGA4	Q8IV77	575 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	RCOR2	Q8IZ40	523 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	D2HGDH	Q8N465	521 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	TEX19	Q8NA77	164 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	CLEC18C	Q8NCF0	446 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	OR2L2	Q8NH16	312 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	MIB2	Q96AX9	1013 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	CD180	Q99467	661 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	NRTN	Q99748	197 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	FAM118B	Q9BPY3	351 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	ASB8	Q9H765	288 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	KIR3DX1	Q9H7L2	352 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	SOHLH2	Q9NX45	425 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	SLC24A2	Q9UI40	661 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	TRHDE	Q9UKU6	1024 aa		10.27	□□□□□ -0.77
LSM4-205	ENST00000597776	UTP20	O75691	2785 aa	Known RBP	10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	C2orf81	A6NN90	581 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	APOC4-APOC2	K7ER74	178 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	CCL22	O00626	93 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	CPNE3	O75131	537 aa	Known RBP	10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	SCRG1	O75711	98 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	APOC2	P02655	101 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	POLR2C	P19387	275 aa	Predicted RBP	10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	LPO	P22079	712 aa	Predicted RBP	10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	PSMB4	P28070	264 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	ADRA1A	P35348	466 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	GEM	P55040	296 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	TUBB4B	P68371	445 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	TMPRSS15	P98073	1019 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	XIAP	P98170	497 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	GPS2	Q13227	327 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	SEMA5A	Q13591	1074 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	LAMB3	Q13751	1172 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	TUBB2A	Q13885	445 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	GSE1	Q14687	1217 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	TAF1A	Q15573	450 aa	Predicted RBP	10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	UGT8	Q16880	541 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	BCL7A	Q4VC05	210 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	CCDC181	Q5TID7	509 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	FAM69B	Q5VUD6	431 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	LCN10	Q6JVE6	187 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	ARMC6	Q6NXE6	501 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	APLF	Q8IW19	511 aa	Predicted RBP	10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	CFAP206	Q8IYR0	622 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	SLC38A9	Q8NBW4	561 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	OR13C4	Q8NGS5	318 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	MR1	Q95460	341 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	ZNF501	Q96CX3	271 aa	Predicted RBP	10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	RBM41	Q96IZ5	413 aa	Known RBP	10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	FCRL4	Q96PJ5	515 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	TUBB2B	Q9BVA1	445 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	TLR10	Q9BXR5	811 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	TSPY26P	Q9H489	355 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	FAM96A	Q9H5X1	160 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	ACSL5	Q9ULC5	683 aa		10.26	□□□□□ -0.77
LSM4-205	ENST00000597776	ARGFX	A6NJG6	315 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	SLC9B1P1	A6NJY1	282 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	ANXA9	O76027	345 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	LCA5L	O95447	670 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	ZBTB11	O95625	1053 aa	Predicted RBP	10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	RECK	O95980	971 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	ZNF140	P52738	457 aa	Predicted RBP	10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	RPS15	P62841	145 aa	Known RBP	10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	PDE1B	Q01064	536 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	OTUD4	Q01804	1114 aa	Known RBP	10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	ABR	Q12979	859 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	SPARCL1	Q14515	664 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	KRT33B	Q14525	404 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	ITPRIPL1	Q6GPH6	555 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	CAPRIN2	Q6IMN6	1127 aa	Known RBP	10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	C11orf63	Q6NUN7	778 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	RANBP10	Q6VN20	620 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	SYVN1	Q86TM6	617 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	BPHL	Q86WA6	291 aa	Predicted RBP	10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	TC2N	Q8N9U0	490 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	OR4E2	Q8NGC2	313 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	CCDC110	Q8TBZ0	833 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	ACTL9	Q8TC94	416 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	DCUN1D1	Q96GG9	259 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	LINC00615	Q96LM1	132 aa	Predicted RBP	10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	GPR87	Q9BY21	358 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	CHST8	Q9H2A9	424 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	KCND1	Q9NSA2	647 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	CRLS1	Q9UJA2	301 aa		10.25	□□□□□ -0.77
LSM4-205	ENST00000597776	POMT2	Q9UKY4	750 aa		10.25	□□□□□ -0.77

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