RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 ART4Q93070 314 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 GFM1Q96RP9 751 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 SCNM1Q9BWG6 230 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 LRRN3Q9H3W5 708 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 SAYSD1Q9NPB0 183 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 IARS2Q9NSE4 1012 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 INTS10Q9NVR2 710 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 ZNF624Q9P2J8 865 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 WASF3Q9UPY6 502 aa19.26■□□□□ 0.67
SHKBP1-214ENST00000597396 ESYT3A0FGR9 886 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 LIN7AO14910 233 aaPredicted RBP19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 EIF3HO15372 352 aaKnown RBP eCLIP19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 MT-CO3P00414 261 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 OR1D5P58170 312 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 UBE2IP63279 158 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 CTBP1Q13363 440 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 NR1D2Q14995 579 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 FASTKD3Q14CZ7 662 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 BRD3Q15059 726 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 TRADDQ15628 312 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 GLE1Q53GS7 698 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 CCDC25Q86WR0 208 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 DENND6AQ8IWF6 608 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 UNC5BQ8IZJ1 945 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 FBXO25Q8TCJ0 367 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 LPGAT1Q92604 370 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 CERS2Q96G23 380 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 C12orf66Q96MD2 445 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 PANX3Q96QZ0 392 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 WDR83Q9BRX9 315 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 ZMYND15Q9H091 742 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 P2RY12Q9H244 342 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 PPANQ9NQ55 473 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 POT1Q9NUX5 634 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 IMP3Q9NV31 184 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 KCNK4Q9NYG8 393 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 KLK13Q9UKR3 277 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 CLCA2Q9UQC9 943 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 CRYL1Q9Y2S2 319 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 PCDHB1Q9Y5F3 818 aa19.25■□□□□ 0.67
SHKBP1-214ENST00000597396 KIF26BQ2KJY2 2108 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 FAM149AA5PLN7 773 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 ERVK-10P10266 1014 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 FMO4P31512 558 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 SLC1A2P43004 574 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 PREPP48147 710 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 RPA4Q13156 261 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 RPE65Q16518 533 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 AMZ1Q400G9 498 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 STEAP4Q687X5 459 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 ZDHHC24Q6UX98 284 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 RBM44Q6ZP01 1051 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 KRT222Q8N1A0 295 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 LKAAEAR1Q8TD35 194 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 PYROXD1Q8WU10 500 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 TMEM159Q96B96 161 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 AHCYL2Q96HN2 611 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 RMDN2Q96LZ7 410 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 DEPDC7Q96QD5 511 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 EPB41L5Q9HCM4 733 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 FBXO6Q9NRD1 293 aaPredicted RBP19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 FAM114A2Q9NRY5 505 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 FBXO5Q9UKT4 447 aa19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 CFAP20Q9Y6A4 193 aaKnown RBP19.24■□□□□ 0.67
SHKBP1-214ENST00000597396 A0A1W2PQM1 296 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 IQCF5A8MTL0 148 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 H3BMM5 538 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 IFRD1O00458 451 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 NTN3O00634 580 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 CASC3O15234 703 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 B4GAT1O43505 415 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 ZNF500O60304 480 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 TCEA3O75764 348 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 S1PR4O95977 384 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 ESR1P03372 595 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 MTHFD1P11586 935 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 CSE1LP55060 971 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 PLOD1Q02809 727 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 TMED2Q15363 201 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 MAP9Q49MG5 647 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 ZNF658BQ4V348 819 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 CDCP2Q5VXM1 449 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 XKR5Q6UX68 686 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 NAPRTQ6XQN6 538 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 TMEM26Q6ZUK4 368 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 RBM12BQ8IXT5 1001 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 SPDYE1Q8NFV5 336 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 INSM2Q96T92 566 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 FOXP3Q9BZS1 431 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 CCDC68Q9H2F9 335 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 DMGDHQ9UI17 866 aaKnown RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 ATXN7L1Q9ULK2 861 aaPredicted RBP19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 NEUROG3Q9Y4Z2 214 aa19.23■□□□□ 0.67
SHKBP1-214ENST00000597396 IGHV1OR21-1A0A087WYE8 117 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 LILRA5A6NI73 299 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 ESPNB1AK53 854 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 D6RAR5 112 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 APOA4P06727 396 aa19.22■□□□□ 0.67
SHKBP1-214ENST00000597396 F7P08709 466 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms