RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 C17orf113A0A1B0GUU1 675 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 UBXN7O94888 489 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 C9P02748 559 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 POLBP06746 335 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 FGF3P11487 239 aaPredicted RBP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 TYRP1P17643 537 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 PDHA2P29803 388 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 HALP42357 657 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 NSG1P42857 185 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 MAGEA3P43357 314 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 PREPP48147 710 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 LEPRP48357 1165 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 PCBP4P57723 403 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 PRAMEP78395 509 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 TRA2AQ13595 282 aaKnown RBP eCLIP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 CAPRIN2Q6IMN6 1127 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 C19orf48Q6RUI8 117 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 CES3Q6UWW8 571 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 LDB1Q86U70 411 aaPredicted RBP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 RBM12BQ8IXT5 1001 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 CFAP206Q8IYR0 622 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 NAT8LQ8N9F0 302 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 OR6P1Q8NGX9 317 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 HNRNPLLQ8WVV9 542 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 SLCO2A1Q92959 643 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 TMEM159Q96B96 161 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 MFSD3Q96ES6 412 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 CRELD1Q96HD1 420 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 AHCYL2Q96HN2 611 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 C12orf66Q96MD2 445 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 SERPINB12Q96P63 405 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 CMKLR1Q99788 373 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 CCM2Q9BSQ5 444 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 OR52A5Q9H2C5 316 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 EPB41L1Q9H4G0 881 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 MRM3Q9HC36 420 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 IMP3Q9NV31 184 aaKnown RBP10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 OCIAD1Q9NX40 245 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 BFARQ9NZS9 450 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 FOXJ2Q9P0K8 574 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 SOX13Q9UN79 622 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 PCDHGA7Q9Y5G6 932 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 PCM1Q15154 2024 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 C9orf172C9J069 976 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 GOLGA8MH3BSY2 632 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 AP3B1O00203 1094 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 PRAMEF10O60809 474 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 AP2A2O94973 939 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 SLC35G4P0C7Q5 338 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 JMJD7P0C870 316 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 IVDP26440 423 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 SLC5A2P31639 672 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 PTGIRP43119 386 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 CAPZBP47756 277 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 MAPK10P53779 464 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 PPP1CAP62136 330 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 COL28A1Q2UY09 1125 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 FASTKD1Q53R41 847 aaKnown RBP10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 SNAP47Q5SQN1 464 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 RNASEH2BQ5TBB1 312 aaKnown RBP10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 NAPRTQ6XQN6 538 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 SPACA3Q8IXA5 215 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 BMPERQ8N8U9 685 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 MCUQ8NE86 351 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 LKAAEAR1Q8TD35 194 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 GRK7Q8WTQ7 553 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 NAF1Q96HR8 494 aaKnown RBP10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 NRTNQ99748 197 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 CATSPERZQ9NTU4 200 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 KLHL3Q9UH77 587 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 PCYOX1Q9UHG3 505 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 SLC24A2Q9UI40 661 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 ACSL6Q9UKU0 697 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 SSUH2Q9Y2M2 353 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 SAR1BQ9Y6B6 198 aa10.73□□□□□ -0.69
SHKBP1-206ENST00000595523 FER1L5A0AVI2 2057 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 SEC16AO15027 2179 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 SLC5A10A0PJK1 596 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 CTAGE9A4FU28 777 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 A8MU76 341 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 NVLO15381 856 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 CD3EAPO15446 510 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 CAPN5O15484 640 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 KIF1CO43896 1103 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 VAPBO95292 243 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 ANKRD34CP0C6C1 535 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 MLNP12872 115 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 ARCN1P48444 511 aaKnown RBP10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 PPM1FP49593 454 aaPredicted RBP10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 TLE3Q04726 772 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 PTK6Q13882 451 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 LYPLAL1Q5VWZ2 237 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 CERS6Q6ZMG9 384 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 PDZD3Q86UT5 571 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 PLXDC1Q8IUK5 500 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 AGBL5Q8NDL9 886 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 ZNF248Q8NDW4 579 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 USP7Q93009 1102 aa10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.72□□□□□ -0.69
SHKBP1-206ENST00000595523 C9orf72Q96LT7 481 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms