RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 PTPRSQ13332 1948 aa16.83■□□□□ 0.29
SHKBP1-205ENST00000594973 NOL3O60936 208 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 ALOX5P09917 674 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 GFAPP14136 432 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 CD247P20963 164 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 MYF6P23409 242 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 PSMD8P48556 350 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 PCYT1AP49585 367 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 HERVK_113P63132 956 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 RHDQ02161 417 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 BCL2L1Q07817 233 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 PLEKHG6Q3KR16 790 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 GPR107Q5VW38 600 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 PIH1D2Q8WWB5 315 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 BADQ92934 168 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 ATP6V1E2Q96A05 226 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 ERVK-6Q9BXR3 956 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 EMILIN2Q9BXX0 1053 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 SYTL2Q9HCH5 934 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 ABCB8Q9NUT2 735 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 HACD3Q9P035 362 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 INTS6Q9UL03 887 aaKnown RBP16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 ERVK-11Q9UQG0 969 aa16.83■□□□□ 0.28
SHKBP1-205ENST00000594973 PPP6CO00743 305 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 SDHDO14521 159 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 CFLARO15519 480 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 AKAP10O43572 662 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 CHRM3P20309 590 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 CTNNB1P35222 781 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 HNRNPFP52597 415 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 RAD51Q06609 339 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 ILF2Q12905 390 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 ART3Q13508 389 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 TSNQ15631 228 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 KCNJ8Q15842 424 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 UNC50Q53HI1 259 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 CTSL3PQ5NE16 218 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 SLC7A5P1Q8MH63 180 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 CPXM2Q8N436 756 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 ANKFN1Q8N957 763 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 MFSD2AQ8NA29 543 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 RCN3Q96D15 328 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 SLC29A1Q99808 456 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 EFHD1Q9BUP0 239 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 IL17CQ9P0M4 197 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 RNF112Q9ULX5 631 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 NCF1BA6NI72 391 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 IQCF5A8MTL0 148 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 NCF1CA8MVU1 366 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 SUPT3HB4E1H0 165 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 TMX2-CTNND1H3BSU7 103 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 J3QRK9 145 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 CDC7O00311 574 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 PLOD2O00469 737 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 MTHFD2P13995 350 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 NCF1P14598 390 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 PKMP14618 531 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 PSMA3P25788 255 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 MSX2P35548 267 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 SEMG2Q02383 582 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 NFATC3Q12968 1075 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 ITGADQ13349 1161 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 RAB39AQ14964 217 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 DGKKQ5KSL6 1271 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 FAM151BQ6UXP7 276 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 FIBINQ8TAL6 211 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 LRTOMTQ8WZ04 291 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 USP13Q92995 863 aaPredicted RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 FBXL8Q96CD0 374 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 L3HYPDHQ96EM0 354 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 ATOH8Q96SQ7 321 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 TFB2MQ9H5Q4 396 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 KLHL3Q9UH77 587 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 TRAF6Q9Y4K3 522 aa16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 COPG1Q9Y678 874 aaKnown RBP16.82■□□□□ 0.28
SHKBP1-205ENST00000594973 C1orf232A0A0U1RR37 186 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 NDUFB5O43674 189 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 VPS26AO75436 327 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 CYBBP04839 570 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 ENO3P13929 434 aaPredicted RBP16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 SLC7A1P30825 629 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 HMGCLP35914 325 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 DPP6P42658 865 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 TRAP1Q12931 704 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 PMS2P3Q13401 168 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 PPP1R3AQ16821 1122 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 MPP7Q5T2T1 576 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 ZBTB49Q6ZSB9 765 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 CPNE9Q8IYJ1 553 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 ZNF786Q8N393 782 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 AFAP1L2Q8N4X5 818 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 RHEBL1Q8TAI7 183 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 NSUN5Q96P11 429 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 SEMA6AQ9H2E6 1030 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 MAGEE1Q9HCI5 957 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 TLR9Q9NR96 1032 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 TSR3Q9UJK0 312 aaKnown RBP16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 VPS9D1Q9Y2B5 631 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 CORINQ9Y5Q5 1042 aa16.81■□□□□ 0.28
SHKBP1-205ENST00000594973 NPEPPSL1A6NEC2 478 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms