RNA–Protein interactions for RNA: ENST00000592621.5

RANBP3-228, Transcript of RAN binding protein 3, human

TSL 5

Gene RANBP3, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP3-228	ENST00000592621	SHC2	P98077	582 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	RPA4	Q13156	261 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	SQSTM1	Q13501	440 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	RPE65	Q16518	533 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	TEDDM1	Q5T9Z0	273 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	HES3	Q5TGS1	186 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	TMPRSS12	Q86WS5	348 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	OTUD6B	Q8N6M0	293 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	DCBLD1	Q8N8Z6	715 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	WDR48	Q8TAF3	677 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	CALML6	Q8TD86	181 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	ELMO1	Q92556	727 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	CFAP36	Q96G28	342 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	RMDN2	Q96LZ7	410 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	INSM2	Q96T92	566 aa	Predicted RBP	11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	FAM167B	Q9BTA0	163 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	FOXP3	Q9BZS1	431 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	WWP1	Q9H0M0	922 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	LRRN3	Q9H3W5	708 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	SLC40A1	Q9NP59	571 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	SAYSD1	Q9NPB0	183 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	FBXO6	Q9NRD1	293 aa	Predicted RBP	11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	FAM114A2	Q9NRY5	505 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	IARS2	Q9NSE4	1012 aa	Known RBP	11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	FAM8A1	Q9UBU6	413 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	GNPTG	Q9UJJ9	305 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	FBXO5	Q9UKT4	447 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	CRYL1	Q9Y2S2	319 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	MED16	Q9Y2X0	877 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	PCDHB1	Q9Y5F3	818 aa		11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	11.43	□□□□□ -0.58
RANBP3-228	ENST00000592621	PTPRB	P23467	1997 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	IGHV1OR21-1	A0A087WYE8	117 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	UBA6	A0AVT1	1052 aa	Predicted RBP	11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	LILRA5	A6NI73	299 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621		F8W8V4	182 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	PFDN6	O15212	129 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	TCEA3	O75764	348 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	HAUS5	O94927	633 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	C1QA	P02745	245 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	RPLP0	P05388	317 aa	Known RBP	11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	MTHFD1	P11586	935 aa	Known RBP	11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	PKM	P14618	531 aa	Known RBP	11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	ITGB6	P18564	788 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	CD1C	P29017	333 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	FMO4	P31512	558 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	HAL	P42357	657 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	PREP	P48147	710 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	CD151	P48509	253 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	EIF3B	P55884	814 aa	Known RBP	11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	OR1D5	P58170	312 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	GPX6	P59796	221 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	MPP1	Q00013	466 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	GBX1	Q14549	363 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	ZNF549	Q6P9A3	640 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	NAPRT	Q6XQN6	538 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	TMPRSS9	Q7Z410	1059 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	GALNT7	Q86SF2	657 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	ZNF761	Q86XN6	746 aa	Predicted RBP	11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	RBM12B	Q8IXT5	1001 aa	Known RBP	11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	KRT222	Q8N1A0	295 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	GALNT15	Q8N3T1	639 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621		Q8N9G6	341 aa	Predicted RBP	11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	AVL9	Q8NBF6	648 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	GSDMB	Q8TAX9	411 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	PYROXD1	Q8WU10	500 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	SH3KBP1	Q96B97	665 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	SCNM1	Q9BWG6	230 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	FAM129A	Q9BZQ8	928 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	LATS2	Q9NRM7	1088 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	SLC17A6	Q9P2U8	582 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	KLK13	Q9UKR3	277 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	VPS9D1	Q9Y2B5	631 aa		11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621	CFAP20	Q9Y6A4	193 aa	Known RBP	11.42	□□□□□ -0.58
RANBP3-228	ENST00000592621		D6RAR5	112 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621		H3BMM5	538 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	NIPSNAP2	O75323	286 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	MT-CO3	P00414	261 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	VIP	P01282	170 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	AHSG	P02765	367 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	SLC35G4	P0C7Q5	338 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	SPINK2	P20155	84 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	ACADL	P28330	430 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	SSTR1	P30872	391 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	CARS	P49589	748 aa	Known RBP	11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	EPHA4	P54764	986 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	GPLD1	P80108	840 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	PLOD1	Q02809	727 aa	Predicted RBP	11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	CFHR1	Q03591	330 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	CAMK2B	Q13554	666 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	BOP1	Q14137	746 aa	Known RBP	11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	GPR18	Q14330	331 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	PTRHD1	Q6GMV3	140 aa	Known RBP	11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	DUS1L	Q6P1R4	473 aa	Known RBP	11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	CNST	Q6PJW8	725 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	KIAA0408	Q6ZU52	694 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	TMEM26	Q6ZUK4	368 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	CYS1	Q717R9	158 aa		11.41	□□□□□ -0.58
RANBP3-228	ENST00000592621	PDZD3	Q86UT5	571 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms