RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 FGF21Q9NSA1 209 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 IMP3Q9NV31 184 aaKnown RBP18.42■□□□□ 0.54
CCDC43-205ENST00000592333 HRASLS2Q9NWW9 162 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 SLC24A2Q9UI40 661 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 PSMD13Q9UNM6 376 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 ARL5AQ9Y689 179 aa18.42■□□□□ 0.54
CCDC43-205ENST00000592333 CFAP99D6REC4 459 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 BUD23O43709 281 aaKnown RBP18.41■□□□□ 0.54
CCDC43-205ENST00000592333 TJP3O95049 919 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 IPO7O95373 1038 aaKnown RBP18.41■□□□□ 0.54
CCDC43-205ENST00000592333 GSTM1P09488 218 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 SLC35G4P0C7Q5 338 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 FOLR1P15328 257 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 MARCKSL1P49006 195 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 XIAPP98170 497 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 GSTM4Q03013 218 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 MSLNQ13421 630 aaPredicted RBP18.41■□□□□ 0.54
CCDC43-205ENST00000592333 DNASE1L3Q13609 305 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 TMTC4Q5T4D3 741 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 CAPRIN2Q6IMN6 1127 aaKnown RBP18.41■□□□□ 0.54
CCDC43-205ENST00000592333 ARMC6Q6NXE6 501 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 KLHDC8BQ8IXV7 354 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 ACTL9Q8TC94 416 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 THAP4Q8WY91 577 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 DCUN1D1Q96GG9 259 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 C12orf66Q96MD2 445 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 LRFN5Q96NI6 719 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 PANX2Q96RD6 677 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 MAP3K3Q99759 626 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 GORASP1Q9BQQ3 440 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 FICDQ9BVA6 458 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 HEMGNQ9BXL5 484 aa18.41■□□□□ 0.54
CCDC43-205ENST00000592333 MRPS18BQ9Y676 258 aaKnown RBP18.41■□□□□ 0.54
CCDC43-205ENST00000592333 PJA2O43164 708 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 GPR39O43194 453 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 KATNA1O75449 491 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 MSL3P1P0C860 447 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 RBP3P10745 1247 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 CTNNA2P26232 953 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 CA5AP35218 305 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 PRLHRP49683 370 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 PMS2P54278 862 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 RWDD2BP57060 319 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 FOXK1P85037 733 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 OTUD4Q01804 1114 aaKnown RBP18.4■□□□□ 0.54
CCDC43-205ENST00000592333 ERV3-1Q14264 604 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 PWWP2BQ6NUJ5 590 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 ZNF517Q6ZMY9 492 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-205ENST00000592333 SNX20Q7Z614 316 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 HM13Q8TCT9 377 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 COL26A1Q96A83 441 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 ELMO2Q96JJ3 720 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 SPATA13Q96N96 652 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 WWP1Q9H0M0 922 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 VPS37BQ9H9H4 285 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 ZNF71Q9NQZ8 489 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-205ENST00000592333 CRLS1Q9UJA2 301 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 BTRCQ9Y297 605 aa18.4■□□□□ 0.54
CCDC43-205ENST00000592333 EPN1Q9Y6I3 576 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-205ENST00000592333 HECTD1Q9ULT8 2610 aa18.39■□□□□ 0.54
CCDC43-205ENST00000592333 H7C0S8 307 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 CPNE3O75131 537 aaKnown RBP18.39■□□□□ 0.53
CCDC43-205ENST00000592333 RFPL1O75677 317 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 ATP1B2P14415 290 aaPredicted RBP18.39■□□□□ 0.53
CCDC43-205ENST00000592333 ITGALP20701 1170 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 CD151P48509 253 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 EIF3EP60228 445 aaKnown RBP18.39■□□□□ 0.53
CCDC43-205ENST00000592333 PPP1CAP62136 330 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 RPS15P62841 145 aaKnown RBP18.39■□□□□ 0.53
CCDC43-205ENST00000592333 PRKAA1Q13131 559 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 UGT8Q16880 541 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 SKIDA1Q1XH10 827 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 SYVN1Q86TM6 617 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 TMTC1Q8IUR5 882 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 NXPE1Q8N323 547 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 ACVR1CQ8NER5 493 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 COPS8Q99627 209 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 TWSG1Q9GZX9 223 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 C1GALT1Q9NS00 363 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 KCND1Q9NSA2 647 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 FKBPLQ9UIM3 349 aa18.39■□□□□ 0.53
CCDC43-205ENST00000592333 IGLV3-16A0A075B6K0 115 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 PIPSLA2A3N6 862 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 F5H423 210 aaPredicted RBP18.38■□□□□ 0.53
CCDC43-205ENST00000592333 KCNN4O15554 427 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 SGTAO43765 313 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 EBLN1P0CF75 366 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 PSMB4P28070 264 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 PTPN4P29074 926 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 ZNF140P52738 457 aaPredicted RBP18.38■□□□□ 0.53
CCDC43-205ENST00000592333 GSDMDP57764 484 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 RPA4Q13156 261 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 GSE1Q14687 1217 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 PTPRCAPQ14761 206 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 ATP1A1-AS1Q5TC04 95 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 IZUMO3Q5VZ72 239 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 ZNF449Q6P9G9 518 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 DARS2Q6PI48 645 aaKnown RBP18.38■□□□□ 0.53
CCDC43-205ENST00000592333 TTC13Q8NBP0 860 aa18.38■□□□□ 0.53
CCDC43-205ENST00000592333 CT55Q8WUE5 264 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms