RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ARRB1P49407 418 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 STARP49675 285 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 TCEAL5Q5H9L2 206 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 UBXN11Q5T124 520 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 SLC39A5Q6ZMH5 540 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 SERINC5Q86VE9 423 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 CMTR2Q8IYT2 770 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 BCO2Q9BYV7 579 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 MINDY3Q9H8M7 445 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 LRTM1Q9HBL6 345 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 GPN1Q9HCN4 374 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 GALNT8Q9NY28 637 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 AHDC1Q5TGY3 1603 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 SNED1Q8TER0 1413 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 FAM86C2PA6NEL3 165 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 CAPN8A6NHC0 703 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 IGFBP5P24593 272 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 GPD2P43304 727 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 TNFAIP8L3Q5GJ75 292 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 AVL9Q8NBF6 648 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 LMLNQ96KR4 655 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 PRICKLE1Q96MT3 831 aaPredicted RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 AARSD1Q9BTE6 412 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 HSD3B7Q9H2F3 369 aa13.15□□□□□ -0.3
SMARCA4-216ENST00000591545 RBM47A0AV96 593 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 NEMP2A6NFY4 417 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 RGS20O76081 388 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 AP2A1O95782 977 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 TSPAN8P19075 237 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 VARSP26640 1264 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 CDKN2BP42772 138 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 CTSKP43235 329 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 KIR3DL1P43629 444 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 LAPTM5Q13571 262 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 ITPRIPL2Q3MIP1 535 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 WDR45BQ5MNZ6 344 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 SCIMPQ6UWF3 145 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 TMPRSS11BQ86T26 416 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 OAFQ86UD1 273 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 TMEM192Q8IY95 271 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 NAT14Q8WUY8 206 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 CLPTM1LQ96KA5 538 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 SDCBP2Q9H190 292 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 SGK2Q9HBY8 427 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 PCDHGB3Q9Y5G1 929 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 EDDM13A0A1B0GTR0 161 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 SLC28A2O43868 658 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 PNLIPRP1P54315 467 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 JAM2P57087 298 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 TEAD2Q15562 447 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 NPY5RQ15761 445 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 TMEM220Q6QAJ8 160 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 HPS6Q86YV9 775 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 ILVBLA1L0T0 632 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 SLC35G6P0C7Q6 338 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 HAPLN1P10915 354 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 SCNN1AP37088 669 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 FOXM1Q08050 763 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 CDCA2Q69YH5 1023 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 FAM131AQ6UXB0 335 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 RNF44Q7L0R7 432 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 FITM2Q8N6M3 262 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 LPGAT1Q92604 370 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 RAD51AP1Q96B01 352 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 ELAC1Q9H777 363 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 SFXN1Q9H9B4 322 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 CCDC177Q9NQR7 707 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 FZD10Q9ULW2 581 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 PPIEQ9UNP9 301 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 COQ4Q9Y3A0 265 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 ELOVL7A1L3X0 281 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 IQCF3P0C7M6 154 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 HOXB2P14652 356 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 ETS2P15036 469 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 ITPKAP23677 461 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 RPS9P46781 194 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 ACAP2Q15057 778 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 C17orf99Q6UX52 265 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 DEF8Q6ZN54 512 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 RAB43Q86YS6 212 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 ARL10Q8N8L6 244 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 NTAN1Q96AB6 310 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 HAVCR1Q96D42 359 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 GTPBP2Q9BX10 602 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 SRMSQ9H3Y6 488 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 WDR55Q9H6Y2 383 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 TRIM39Q9HCM9 518 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 PTTG2Q9NZH5 202 aa13.14□□□□□ -0.31
SMARCA4-216ENST00000591545 ARHGEF33A8MVX0 844 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 CASKO14936 926 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 TRBC1P01850 177 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 BUD31P41223 144 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 RPS24P62847 133 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 CYP4F2P78329 520 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 CYP4F3Q08477 520 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 NANOGNBQ7Z5D8 188 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 KLK6Q92876 244 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 ZNF599Q96NL3 588 aa13.13□□□□□ -0.31
SMARCA4-216ENST00000591545 NECTIN4Q96NY8 510 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms