RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 CCDC74BQ96LY2 380 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 C12orf66Q96MD2 445 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 WDR83Q9BRX9 315 aaKnown RBP11.27□□□□□ -0.61
VMP1-211ENST00000591315 NRSN2Q9GZP1 204 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 PLAC1Q9HBJ0 212 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 XAB2Q9HCS7 855 aaKnown RBP11.27□□□□□ -0.61
VMP1-211ENST00000591315 SLC40A1Q9NP59 571 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 KLHL3Q9UH77 587 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 RAXQ9Y2V3 346 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 SNX24Q9Y343 169 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 MAD1L1Q9Y6D9 718 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 SPTBP11277 2137 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 ZCWPW2A0A1B0GU75 182 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 FAM237BA0A1B0GVD1 139 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 CCDC188H7C350 402 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 KCNJ13O60928 360 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 AP2A2O94973 939 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 MTHFD1P11586 935 aaKnown RBP11.26□□□□□ -0.61
VMP1-211ENST00000591315 CCL4P13236 92 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 SLC2A4P14672 509 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 ITIH1P19827 911 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 CCKBRP32239 447 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 HALP42357 657 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 NSG1P42857 185 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 LEPRP48357 1165 aaKnown RBP11.26□□□□□ -0.61
VMP1-211ENST00000591315 LSSP48449 732 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 ITGA8P53708 1063 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 DHX34Q14147 1143 aaKnown RBP11.26□□□□□ -0.61
VMP1-211ENST00000591315 TRADDQ15628 312 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 BBS9Q3SYG4 887 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 KIAA0930Q6ICG6 404 aaPredicted RBP11.26□□□□□ -0.61
VMP1-211ENST00000591315 CENPUQ71F23 418 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 VRK3Q8IV63 474 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 WDR48Q8TAF3 677 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 ELMO1Q92556 727 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 ZNF592Q92610 1267 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 PEX13Q92968 403 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 PMEPA1Q969W9 287 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.26□□□□□ -0.61
VMP1-211ENST00000591315 FAM136AQ96C01 138 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 NXPE2Q96DL1 559 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 RNF31Q96EP0 1072 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 AHCYL2Q96HN2 611 aaKnown RBP11.26□□□□□ -0.61
VMP1-211ENST00000591315 SGSM3Q96HU1 749 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 P2RY12Q9H244 342 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 OR52A5Q9H2C5 316 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 DPH5Q9H2P9 285 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 POLR1BQ9H9Y6 1135 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 ASCL3Q9NQ33 180 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 SAMD15Q9P1V8 674 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 GALPQ9UBC7 116 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 RNF14Q9UBS8 474 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 ACSL5Q9ULC5 683 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 RPS6KL1Q9Y6S9 549 aa11.26□□□□□ -0.61
VMP1-211ENST00000591315 MGAQ8IWI9 3026 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 CHD6Q8TD26 2715 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 CCDC187A0A096LP49 1063 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 LILRA5A6NI73 299 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 EFCAB8A8MWE9 144 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
VMP1-211ENST00000591315 AP3B1O00203 1094 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 KIF1CO43896 1103 aaKnown RBP11.25□□□□□ -0.61
VMP1-211ENST00000591315 SNRNP200O75643 2136 aaKnown RBP11.25□□□□□ -0.61
VMP1-211ENST00000591315 TNFSF15O95150 251 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 SLC35G4P0C7Q5 338 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 FMO4P31512 558 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 CCR7P32248 378 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 LIMK2P53671 638 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 EIF3BP55884 814 aaKnown RBP11.25□□□□□ -0.61
VMP1-211ENST00000591315 SQSTM1Q13501 440 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 BOP1Q14137 746 aaKnown RBP11.25□□□□□ -0.61
VMP1-211ENST00000591315 CTSL3PQ5NE16 218 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 LYPLAL1Q5VWZ2 237 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 HIBCHQ6NVY1 386 aaPredicted RBP11.25□□□□□ -0.61
VMP1-211ENST00000591315 NEPROQ6NW34 567 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 CERS6Q6ZMG9 384 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 SYDE1Q6ZW31 735 aaPredicted RBP11.25□□□□□ -0.61
VMP1-211ENST00000591315 RAB11FIP2Q7L804 512 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 TMEM135Q86UB9 458 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 PROSER1Q86XN7 944 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 DENND6AQ8IWF6 608 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 FBXO39Q8N4B4 442 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 OR10G6Q8NH81 332 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 WDR36Q8NI36 951 aaKnown RBP11.25□□□□□ -0.61
VMP1-211ENST00000591315 LPGAT1Q92604 370 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 SH3KBP1Q96B97 665 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 STAMBPL1Q96FJ0 436 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 LIN37Q96GY3 246 aaPredicted RBP11.25□□□□□ -0.61
VMP1-211ENST00000591315 TMEM74Q96NL1 305 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 ZMYND15Q9H091 742 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 STN1Q9H668 368 aaKnown RBP11.25□□□□□ -0.61
VMP1-211ENST00000591315 POT1Q9NUX5 634 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 SLC17A6Q9P2U8 582 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 PISDQ9UG56 409 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 LOXL2Q9Y4K0 774 aa11.25□□□□□ -0.61
VMP1-211ENST00000591315 C17orf113A0A1B0GUU1 675 aa11.24□□□□□ -0.61
VMP1-211ENST00000591315 UBA6A0AVT1 1052 aaPredicted RBP11.24□□□□□ -0.61
VMP1-211ENST00000591315 SLC5A10A0PJK1 596 aa11.24□□□□□ -0.61
VMP1-211ENST00000591315 SRRM3A6NNA2 597 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms