RNA–Protein interactions for RNA: ENST00000589729.1

AC040963.1-202, humanhuman

TSL 5 BASIC

Gene AC040963.1, Length 644 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040963.1-202ENST00000589729 USP53Q70EK8 1073 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 SLC9B2Q86UD5 537 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 CTAGE6Q86UF2 777 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 CCDC25Q86WR0 208 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 CTAGE4Q8IX94 777 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 ZBED8Q8IZ13 594 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 MMGT1Q8N4V1 131 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 ART4Q93070 314 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 CXorf40BQ96DE9 158 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 BIRC8Q96P09 236 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 INSM2Q96T92 566 aaPredicted RBP16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 SLC38A3Q99624 504 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 ZMYND15Q9H091 742 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 RAB17Q9H0T7 212 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 OR52A5Q9H2C5 316 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 KCNK4Q9NYG8 393 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 GALPQ9UBC7 116 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 ZC3H7BQ9UGR2 993 aaKnown RBP16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 DMGDHQ9UI17 866 aaKnown RBP16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 ANGPTL2Q9UKU9 493 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 CLCA2Q9UQC9 943 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 RUVBL2Q9Y230 463 aaKnown RBP16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 FAM169AQ9Y6X4 670 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 ASPMQ8IZT6 3477 aa16.41■□□□□ 0.22
AC040963.1-202ENST00000589729 IGHV1OR21-1A0A087WYE8 117 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 E7ESA3 106 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 PRMT5O14744 637 aaPredicted RBP16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 S1PR4O95977 384 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 VIPP01282 170 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 FTH1P02794 183 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 MTHFD1P11586 935 aaKnown RBP16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 HOXB3P14651 431 aaPredicted RBP16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 OGNP20774 298 aaKnown RBP16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 PGGT1BP53609 377 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 PPP1CAP62136 330 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 E2F1Q01094 437 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 THOC5Q13769 683 aaKnown RBP16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 SPANXN3Q5MJ09 141 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 STEAP4Q687X5 459 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 PTRHD1Q6GMV3 140 aaKnown RBP16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 ZNF549Q6P9A3 640 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 CNSTQ6PJW8 725 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 RBM44Q6ZP01 1051 aaKnown RBP16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 ATXN7L3BQ96GX2 97 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 GFM1Q96RP9 751 aaKnown RBP16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 SEMA6CQ9H3T2 930 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 EPB41L5Q9HCM4 733 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 SARS2Q9NP81 518 aaKnown RBP16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 OGFRQ9NZT2 677 aa16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 DNMT3AQ9Y6K1 912 aaPredicted RBP16.4■□□□□ 0.22
AC040963.1-202ENST00000589729 KRT87PA6NCN2 255 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 TUBB4AP04350 444 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 OR56A5P0C7T3 313 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 SLC2A4P14672 509 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 JUPP14923 745 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 TYRP1P17643 537 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 CD1CP29017 333 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 HALP42357 657 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 SHC2P98077 582 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 WASH2PQ6VEQ5 465 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 CCNI2Q6ZMN8 369 aaPredicted RBP16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 TMPRSS12Q86WS5 348 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 DCBLD1Q8N8Z6 715 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 BBOF1Q8ND07 529 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 PHC3Q8NDX5 983 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 RSC1A1Q92681 617 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 CERS2Q96G23 380 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 NDNQ99608 321 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 TTC1Q99614 292 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 SLC30A3Q99726 388 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 HGH1Q9BTY7 390 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 VPS37BQ9H9H4 285 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 WASH6PQ9NQA3 447 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 ZDHHC18Q9NUE0 388 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 CIDEBQ9UHD4 219 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 GNPTGQ9UJJ9 305 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 FBXO5Q9UKT4 447 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 NEUROG3Q9Y4Z2 214 aa16.39■□□□□ 0.21
AC040963.1-202ENST00000589729 SLC5A10A0PJK1 596 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 MAGEB16A2A368 324 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 C1QTNF9BB2RNN3 333 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 BHMG1C9JSJ3 638 aaPredicted RBP16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 C1QTNF9P0C862 333 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 RPS3P23396 243 aaKnown RBP eCLIP16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 GABRB3P28472 473 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 CARSP49589 748 aaKnown RBP16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 GFERP55789 205 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 CAPRIN2Q6IMN6 1127 aaKnown RBP16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 TMEM26Q6ZUK4 368 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 SDCCAG8Q86SQ7 713 aaPredicted RBP16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 PDZD3Q86UT5 571 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 GALNT15Q8N3T1 639 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 RCBTB1Q8NDN9 531 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 MNS1Q8NEH6 495 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 OR6C4Q8NGE1 309 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 GIMAP7Q8NHV1 300 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 C9orf72Q96LT7 481 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 FAM167BQ9BTA0 163 aa16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 TMEM121BQ9BXQ6 578 aaPredicted RBP16.38■□□□□ 0.21
AC040963.1-202ENST00000589729 SLC40A1Q9NP59 571 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms