RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CSE1LP55060 971 aaKnown RBP19.19■□□□□ 0.66
CIRBP-220ENST00000588917 BIRC2Q13490 618 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 NR0B2Q15466 257 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 KBTBD12Q3ZCT8 623 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 SYTL3Q4VX76 610 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 ZNF789Q5FWF6 425 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 CTSL3PQ5NE16 218 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 PLEKHS1Q5SXH7 462 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 GRTP1Q5TC63 336 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 EMBQ6PCB8 327 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 GPR156Q8NFN8 814 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 CNDP2Q96KP4 475 aaKnown RBP19.19■□□□□ 0.66
CIRBP-220ENST00000588917 CCDC77Q9BR77 488 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 AARSD1Q9BTE6 412 aaKnown RBP19.19■□□□□ 0.66
CIRBP-220ENST00000588917 STN1Q9H668 368 aaKnown RBP19.19■□□□□ 0.66
CIRBP-220ENST00000588917 COG4Q9H9E3 785 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 PRDM8Q9NQV8 689 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 RABGEF1Q9UJ41 708 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 BTBD3Q9Y2F9 522 aa19.19■□□□□ 0.66
CIRBP-220ENST00000588917 B4DGG1 531 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 IFRD1O00458 451 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-220ENST00000588917 TNFSF14O43557 240 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 CBFA2T3O75081 653 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 VPS26AO75436 327 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 ABHD2P08910 425 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 SLC35G4P0C7Q5 338 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 MYBL2P10244 700 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 CKMT1AP12532 417 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 CEACAM1P13688 526 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 XRCC1P18887 633 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-220ENST00000588917 AOAHP28039 575 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 GABRB3P28472 473 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 CCR7P32248 378 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 SPRP35270 261 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-220ENST00000588917 GP5P40197 560 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 DAB2P98082 770 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 KLHL38Q2WGJ6 581 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 PROX2Q3B8N5 592 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 TTLL9Q3SXZ7 439 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 C14orf28Q4W4Y0 310 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 SLC9B2Q86UD5 537 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 C17orf82Q86X59 251 aaPredicted RBP19.18■□□□□ 0.66
CIRBP-220ENST00000588917 PPM1NQ8N819 430 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 MAPK15Q8TD08 544 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 NAT14Q8WUY8 206 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 SH3KBP1Q96B97 665 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 TXLNGYQ9BZA5 131 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 ACSS3Q9H6R3 686 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 TAS2R13Q9NYV9 303 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 RAB21Q9UL25 225 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 PADI4Q9UM07 663 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 VWA7Q9Y334 891 aa19.18■□□□□ 0.66
CIRBP-220ENST00000588917 LRP4O75096 1905 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 SLC5A10A0PJK1 596 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 A6NCN8 305 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 IQCF5A8MTL0 148 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 RIPK2O43353 540 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 GPC4O75487 556 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 GLB1P16278 677 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 RPL10P27635 214 aaKnown RBP19.17■□□□□ 0.66
CIRBP-220ENST00000588917 HSPA14Q0VDF9 509 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 TRIP6Q15654 476 aaKnown RBP19.17■□□□□ 0.66
CIRBP-220ENST00000588917 MAP9Q49MG5 647 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 ZNF658BQ4V348 819 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-220ENST00000588917 FAM45BPQ6NSW5 357 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 ZNF549Q6P9A3 640 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 FAM83HQ6ZRV2 1179 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-220ENST00000588917 ZC3HC1Q86WB0 502 aaKnown RBP19.17■□□□□ 0.66
CIRBP-220ENST00000588917 RBM12BQ8IXT5 1001 aaKnown RBP19.17■□□□□ 0.66
CIRBP-220ENST00000588917 NAGSQ8N159 534 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 KRT222Q8N1A0 295 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 SFRP1Q8N474 314 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 BAHD1Q8TBE0 780 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-220ENST00000588917 FAM45AQ8TCE6 357 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 INPP5DQ92835 1189 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 NAT6Q93015 286 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 RHOJQ9H4E5 214 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 SMYD2Q9NRG4 433 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 SIRPGQ9P1W8 387 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 FAM8A1Q9UBU6 413 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 HEBP2Q9Y5Z4 205 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 IKBKGQ9Y6K9 419 aa19.17■□□□□ 0.66
CIRBP-220ENST00000588917 TP53BP1Q12888 1972 aaPredicted RBP19.17■□□□□ 0.66
CIRBP-220ENST00000588917 EME2A4GXA9 379 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-220ENST00000588917 CXorf49A8MYA2 514 aaPredicted RBP19.16■□□□□ 0.66
CIRBP-220ENST00000588917 NUDT21O43809 227 aaKnown RBP19.16■□□□□ 0.66
CIRBP-220ENST00000588917 NOBOXO60393 691 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 NIPSNAP2O75323 286 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 C1QAP02745 245 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 CDK4P11802 303 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 PNLIPP16233 465 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 ITGB6P18564 788 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 BOP1Q14137 746 aaKnown RBP19.16■□□□□ 0.66
CIRBP-220ENST00000588917 SEPT7Q16181 437 aaKnown RBP19.16■□□□□ 0.66
CIRBP-220ENST00000588917 CAPRIN2Q6IMN6 1127 aaKnown RBP19.16■□□□□ 0.66
CIRBP-220ENST00000588917 GLRX5Q86SX6 157 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 SLC35F3Q8IY50 421 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 GSPT2Q8IYD1 628 aaKnown RBP19.16■□□□□ 0.66
CIRBP-220ENST00000588917 ARL14Q8N4G2 192 aa19.16■□□□□ 0.66
CIRBP-220ENST00000588917 ZFPM2Q8WW38 1151 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms