RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, human

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-219	ENST00000588411	MAP7	Q14244	749 aa		21.31	■■□□□ 1
CIRBP-219	ENST00000588411	OASL	Q15646	514 aa	Known RBP	21.31	■■□□□ 1
CIRBP-219	ENST00000588411	SKIDA1	Q1XH10	827 aa		21.31	■■□□□ 1
CIRBP-219	ENST00000588411	SERPINA9	Q86WD7	417 aa		21.31	■■□□□ 1
CIRBP-219	ENST00000588411	OOSP2	Q86WS3	158 aa		21.31	■■□□□ 1
CIRBP-219	ENST00000588411	TAB3	Q8N5C8	712 aa	Predicted RBP	21.31	■■□□□ 1
CIRBP-219	ENST00000588411	ESX1	Q8N693	406 aa		21.31	■■□□□ 1
CIRBP-219	ENST00000588411	CCDC89	Q8N998	374 aa		21.31	■■□□□ 1
CIRBP-219	ENST00000588411	DNAAF3	Q8N9W5	541 aa		21.31	■■□□□ 1
CIRBP-219	ENST00000588411	KLHL6	Q8WZ60	621 aa		21.31	■■□□□ 1
CIRBP-219	ENST00000588411	OR6C1	Q96RD1	312 aa		21.31	■■□□□ 1
CIRBP-219	ENST00000588411	INSM2	Q96T92	566 aa	Predicted RBP	21.31	■■□□□ 1
CIRBP-219	ENST00000588411	CD180	Q99467	661 aa		21.31	■■□□□ 1
CIRBP-219	ENST00000588411	ZNF891	A8MT65	544 aa	Predicted RBP	21.3	■■□□□ 1
CIRBP-219	ENST00000588411	GSTM1	P09488	218 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	SFTPC	P11686	197 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	WT1	P19544	449 aa	Predicted RBP	21.3	■■□□□ 1
CIRBP-219	ENST00000588411	ARL4D	P49703	201 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	GSTM4	Q03013	218 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	ABHD18	Q0P651	414 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	CDH17	Q12864	832 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	PPP1R21	Q6ZMI0	780 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	ZNF605	Q86T29	641 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	EXTL1	Q92935	676 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	21.3	■■□□□ 1
CIRBP-219	ENST00000588411	CDKN2AIPNL	Q96HQ2	116 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	ULBP3	Q9BZM4	244 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	SPRY4	Q9C004	299 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	KIR3DX1	Q9H7L2	352 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	ATM	Q13315	3056 aa		21.3	■■□□□ 1
CIRBP-219	ENST00000588411	KALRN	O60229	2985 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	IGLV3-16	A0A075B6K0	115 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	TRBV5-4	A0A0C4DH59	114 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	OR5K3	A6NET4	321 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	QSOX1	O00391	747 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	IFRD1	O00458	451 aa	Predicted RBP	21.29	■■□□□ 1
CIRBP-219	ENST00000588411	SGTA	O43765	313 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	KIF1C	O43896	1103 aa	Known RBP	21.29	■■□□□ 1
CIRBP-219	ENST00000588411	AP2A2	O94973	939 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	NELFE	P18615	380 aa	Known RBP	21.29	■■□□□ 1
CIRBP-219	ENST00000588411	DNTTIP2	Q5QJE6	756 aa	Known RBP	21.29	■■□□□ 1
CIRBP-219	ENST00000588411	MEI1	Q5TIA1	1274 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	KMT5C	Q86Y97	462 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	RASGRP3	Q8IV61	690 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	SIDT2	Q8NBJ9	832 aa	Known RBP	21.29	■■□□□ 1
CIRBP-219	ENST00000588411	NAT14	Q8WUY8	206 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	RMDN2	Q96LZ7	410 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	ETNK1	Q9HBU6	452 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	PDE7B	Q9NP56	450 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	PIH1D1	Q9NWS0	290 aa	Known RBP	21.29	■■□□□ 1
CIRBP-219	ENST00000588411	HRASLS2	Q9NWW9	162 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	SLC24A2	Q9UI40	661 aa		21.29	■■□□□ 1
CIRBP-219	ENST00000588411	UBA6	A0AVT1	1052 aa	Predicted RBP	21.28	■■□□□ 1
CIRBP-219	ENST00000588411	HEATR9	A2RTY3	570 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	TLCD2	A6NGC4	264 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	MROH6	A6NGR9	719 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	DLGAP3	O95886	979 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	MSN	P26038	577 aa	Known RBP	21.28	■■□□□ 1
CIRBP-219	ENST00000588411	SH3BP2	P78314	561 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	PRKAA1	Q13131	559 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	RPA4	Q13156	261 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	CAPRIN2	Q6IMN6	1127 aa	Known RBP	21.28	■■□□□ 1
CIRBP-219	ENST00000588411	DUS1L	Q6P1R4	473 aa	Known RBP	21.28	■■□□□ 1
CIRBP-219	ENST00000588411	ZNF662	Q6ZS27	426 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	PPP1R3B	Q86XI6	285 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	SPDYE1	Q8NFV5	336 aa	Predicted RBP	21.28	■■□□□ 1
CIRBP-219	ENST00000588411	OR52K1	Q8NGK4	314 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	C1orf54	Q8WWF1	131 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	SLC45A3	Q96JT2	553 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	TTC1	Q99614	292 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	SLC12A9	Q9BXP2	914 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	COG4	Q9H9E3	785 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	LZTFL1	Q9NQ48	299 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	SEMA5B	Q9P283	1151 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411	PAK5	Q9P286	719 aa		21.28	■■□□□ 1
CIRBP-219	ENST00000588411		F8W8V4	182 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	SUN1	O94901	812 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	FGF5	P12034	268 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	NSG1	P42857	185 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	CDKN1C	P49918	316 aa	Predicted RBP	21.27	■■□□□ 1
CIRBP-219	ENST00000588411	CYP4F2	P78329	520 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	MC1R	Q01726	317 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	ACY1	Q03154	408 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	SNX1	Q13596	522 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	ITIH4	Q14624	930 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	TBR1	Q16650	682 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	LINC00303	Q3SY05	128 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	C6orf15	Q6UXA7	325 aa	Predicted RBP	21.27	■■□□□ 1
CIRBP-219	ENST00000588411	BPHL	Q86WA6	291 aa	Predicted RBP	21.27	■■□□□ 1
CIRBP-219	ENST00000588411	CARF	Q8N187	725 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	MAIP1	Q8WWC4	291 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	STAMBPL1	Q96FJ0	436 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	SLC41A2	Q96JW4	573 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	CATSPER2	Q96P56	530 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	SEMA4C	Q9C0C4	833 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	RAB6B	Q9NRW1	208 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	SMARCAL1	Q9NZC9	954 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	RARRES3	Q9UL19	164 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	BAHCC1	Q9P281	2608 aa		21.27	■■□□□ 1
CIRBP-219	ENST00000588411	MATN2	O00339	956 aa		21.26	■□□□□ 0.99

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