RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 GOLGA8MH3BSY2 632 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 TAF4O00268 1085 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 PRMT5O14744 637 aaPredicted RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 TOX3O15405 576 aaPredicted RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 NDUFS3O75489 264 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 TNFSF15O95150 251 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 JMJD7P0C870 316 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 THRAP10827 490 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 HOXB3P14651 431 aaPredicted RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 OGNP20774 298 aaKnown RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 CSTF2P33240 577 aaKnown RBP eCLIP9.88□□□□□ -0.83
TPM4-207ENST00000588032 CFHR1Q03591 330 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 GPR18Q14330 331 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 KRT33BQ14525 404 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 MORF4L2Q15014 288 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 ANKRD20A4Q4UJ75 823 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 ZNF658BQ4V348 819 aaPredicted RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 RNF187Q5TA31 235 aaPredicted RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 TMEM164Q5U3C3 297 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 SYT10Q6XYQ8 523 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 TMPRSS9Q7Z410 1059 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 ZNF761Q86XN6 746 aaPredicted RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 JAMLQ86YT9 394 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 LMNTD2Q8IXW0 634 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 BBOF1Q8ND07 529 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 AGBL5Q8NDL9 886 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 SNIP1Q8TAD8 396 aaKnown RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 GABPB2Q8TAK5 448 aaPredicted RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 CCDC97Q96F63 343 aaPredicted RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 ZDHHC12Q96GR4 267 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 PRR11Q96HE9 360 aaPredicted RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 CCDC74BQ96LY2 380 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 C12orf66Q96MD2 445 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 PANX3Q96QZ0 392 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 NAT9Q9BTE0 207 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 TBC1D10AQ9BXI6 508 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 ZMYND15Q9H091 742 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 OR52A5Q9H2C5 316 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 KIR3DX1Q9H7L2 352 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 ASCL3Q9NQ33 180 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 IMP3Q9NV31 184 aaKnown RBP9.88□□□□□ -0.83
TPM4-207ENST00000588032 EPHA6Q9UF33 1036 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 LOXL2Q9Y4K0 774 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 PCDHGA7Q9Y5G6 932 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 PRSS21Q9Y6M0 314 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 RP1P56715 2156 aa9.88□□□□□ -0.83
TPM4-207ENST00000588032 ZFC3H1O60293 1989 aaKnown RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 A0A087WV48 116 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 A0A1W2PNU3 283 aaPredicted RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 H3BMM5 538 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 FANCGO15287 622 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 NVLO15381 856 aaKnown RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 RRP8O43159 456 aaKnown RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 OR1I1O60431 355 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 USP1O94782 785 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 TTC4O95801 387 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 C9P02748 559 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 ANKRD34CP0C6C1 535 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 RPS3P23396 243 aaKnown RBP eCLIP9.87□□□□□ -0.83
TPM4-207ENST00000588032 IVDP26440 423 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 ARNTP27540 789 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 CSF2RBP32927 897 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 MAPK9P45984 424 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 ARCN1P48444 511 aaKnown RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 ADARP55265 1226 aaKnown RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 PCBP4P57723 403 aaKnown RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 SEMA3AQ14563 771 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 DNAJC21Q5F1R6 531 aaKnown RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 IZUMO3Q5VZ72 239 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 NEPROQ6NW34 567 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 FOXR1Q6PIV2 292 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 CES3Q6UWW8 571 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 XKR5Q6UX68 686 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 MAATS1Q7Z4T9 603 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 ARHGAP22Q7Z5H3 698 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 CLEC14AQ86T13 490 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 PDIK1LQ8N165 341 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 C17orf53Q8N3J3 647 aaPredicted RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 ZNF248Q8NDW4 579 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 SPATA4Q8NEY3 305 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 CALML6Q8TD86 181 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 NAT14Q8WUY8 206 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 ASZ1Q8WWH4 475 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 ELMO1Q92556 727 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 TFGQ92734 400 aaPredicted RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 STAMBPL1Q96FJ0 436 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 SNF8Q96H20 258 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 SIGLEC10Q96LC7 697 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 MVB12BQ9H7P6 319 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 MARCH4Q9P2E8 410 aaPredicted RBP9.87□□□□□ -0.83
TPM4-207ENST00000588032 FAM8A1Q9UBU6 413 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 GNPTGQ9UJJ9 305 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 MAD1L1Q9Y6D9 718 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 RPS6KL1Q9Y6S9 549 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 MYLKQ15746 1914 aa9.87□□□□□ -0.83
TPM4-207ENST00000588032 MN1Q10571 1320 aaPredicted RBP9.86□□□□□ -0.83
TPM4-207ENST00000588032 SLC5A10A0PJK1 596 aa9.86□□□□□ -0.83
TPM4-207ENST00000588032 FAM187AA6NFU0 413 aa9.86□□□□□ -0.83
TPM4-207ENST00000588032 B4E171 279 aa9.86□□□□□ -0.83
TPM4-207ENST00000588032 TTI1O43156 1089 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms