RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 TMEM214Q6NUQ4 689 aaKnown RBP18.3■□□□□ 0.52
DDX39A-206ENST00000587730 GTF2H2CQ6P1K8 395 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 LETMD1Q6P1Q0 360 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 TBPL2Q6SJ96 375 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 GOLGA7Q7Z5G4 137 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 CHPT1Q8WUD6 406 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 GLT1D1Q96MS3 346 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 ZNF583Q96ND8 569 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 TRIM8Q9BZR9 551 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 RAD21L1Q9H4I0 556 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 TLR9Q9NR96 1032 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 DNMT3LQ9UJW3 386 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 PDE10AQ9Y233 779 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 ANKRD66B4E2M5 251 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 TLR5O60602 858 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 GJB3O75712 270 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 GLUD1P00367 558 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 COL6A1P12109 1028 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 TRAF2Q12933 501 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 MRPL58Q14197 206 aaKnown RBP18.29■□□□□ 0.52
DDX39A-206ENST00000587730 TAF1CQ15572 869 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-206ENST00000587730 DEFB115Q30KQ5 88 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 PLA2G4EQ3MJ16 856 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 SLC44A4Q53GD3 710 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 ZRANB3Q5FWF4 1079 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 C6orf141Q5SZD1 244 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 GRAMD4Q6IC98 578 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 SULT1C3Q6IMI6 304 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 TTC23LQ6PF05 361 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 SLC24A5Q71RS6 500 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 RALGPS2Q86X27 583 aaPredicted RBP18.29■□□□□ 0.52
DDX39A-206ENST00000587730 CPNE9Q8IYJ1 553 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 EID3Q8N140 333 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 LPCAT1Q8NF37 534 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 P2RY12Q9H244 342 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 TOR3AQ9H497 397 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 FAM118AQ9NWS6 357 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 PKP3Q9Y446 797 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 RAI2Q9Y5P3 530 aa18.29■□□□□ 0.52
DDX39A-206ENST00000587730 ELOVL7A1L3X0 281 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 SOBPA7XYQ1 873 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 F8W810 466 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 PRMT5O14744 637 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 PRLP01236 227 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 OCM2P0CE71 109 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 OCMP0CE72 109 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 PRSS56P0CW18 603 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 PORP16435 677 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 RPS3P23396 243 aaKnown RBP eCLIP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 ARL1P40616 181 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 OR1G1P47890 313 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 PIK3CGP48736 1102 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 CLCN7P51798 805 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 RAD23AP54725 363 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 PPP2R2BQ00005 443 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 MAPKAPK3Q16644 382 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 FAM219BQ5XKK7 198 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 ATG9BQ674R7 924 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 XAF1Q6GPH4 301 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 PSAPL1Q6NUJ1 521 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 SCIMPQ6UWF3 145 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 ZNF783Q6ZMS7 281 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 RNF168Q8IYW5 571 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 OR52B6Q8NGF0 335 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 CCDC138Q96M89 665 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 SPON2Q9BUD6 331 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 ADNPQ9H2P0 1102 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 FKBPLQ9UIM3 349 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 GNGT2O14610 69 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 RECQL5O94762 991 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 ZBTB11O95625 1053 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 CST1P01037 141 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 CYBAP13498 195 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 ITIH1P19827 911 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 MTPNP58546 118 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 CYP4F3Q08477 520 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 GPR17Q13304 367 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 KIAA0040Q15053 153 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 RGS21Q2M5E4 152 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 GTF2IRD2BQ6EKJ0 949 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 C17orf99Q6UX52 265 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 DCDC5Q6ZRR9 648 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 NEK10Q6ZWH5 1172 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 R3HCC1LQ7Z5L2 792 aaKnown RBP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 MILR1Q7Z6M3 343 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 GTF2IRD2Q86UP8 949 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 HIPK1Q86Z02 1210 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 PIANPQ8IYJ0 282 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 SPARTQ8N0X7 666 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 ZNF548Q8NEK5 533 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 OR5K1Q8NHB7 308 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 SNX19Q92543 992 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 ITPKCQ96DU7 683 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 SLC47A1Q96FL8 570 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 HHIPL1Q96JK4 782 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 ACTL8Q9H568 366 aa18.28■□□□□ 0.52
DDX39A-206ENST00000587730 POLR3HQ9Y535 204 aaPredicted RBP18.28■□□□□ 0.52
DDX39A-206ENST00000587730 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.27■□□□□ 0.52
DDX39A-206ENST00000587730 A0A0D9SEW6 157 aa18.27■□□□□ 0.52
DDX39A-206ENST00000587730 MANSC4A6NHS7 340 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms