RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 ID4P47928 161 aa18.77■□□□□ 0.6
DDX39A-204ENST00000586558 ACADVLP49748 655 aa18.77■□□□□ 0.6
DDX39A-204ENST00000586558 SIM1P81133 766 aaPredicted RBP18.77■□□□□ 0.6
DDX39A-204ENST00000586558 BIRC2Q13490 618 aa18.77■□□□□ 0.6
DDX39A-204ENST00000586558 BOP1Q14137 746 aaKnown RBP18.77■□□□□ 0.6
DDX39A-204ENST00000586558 SEPT7Q16181 437 aaKnown RBP18.77■□□□□ 0.6
DDX39A-204ENST00000586558 CNSTQ6PJW8 725 aa18.77■□□□□ 0.6
DDX39A-204ENST00000586558 SLC9B2Q86UD5 537 aa18.77■□□□□ 0.6
DDX39A-204ENST00000586558 ARL14Q8N4G2 192 aa18.77■□□□□ 0.6
DDX39A-204ENST00000586558 PATE1Q8WXA2 126 aa18.77■□□□□ 0.6
DDX39A-204ENST00000586558 CDC42EP4Q9H3Q1 356 aaKnown RBP18.77■□□□□ 0.6
DDX39A-204ENST00000586558 KLHL42Q9P2K6 505 aa18.77■□□□□ 0.6
DDX39A-204ENST00000586558 APOBEC2Q9Y235 224 aaKnown RBP18.77■□□□□ 0.6
DDX39A-204ENST00000586558 SPTBN4Q9H254 2564 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 SLC5A10A0PJK1 596 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 CPED1A4D0V7 1026 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 IQCF5A8MTL0 148 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 E5RI56 91 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 C1QAP02745 245 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 PNLIPP16233 465 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 MCM3P25205 808 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 GABRB3P28472 473 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 CCR7P32248 378 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 MAZP56270 477 aaKnown RBP18.76■□□□□ 0.59
DDX39A-204ENST00000586558 DNAJC3Q13217 504 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 PLEKHS1Q5SXH7 462 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 GUSBP11Q6P575 273 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 ZNF549Q6P9A3 640 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 TRMT10CQ7L0Y3 403 aaKnown RBP18.76■□□□□ 0.59
DDX39A-204ENST00000586558 OTOAQ7RTW8 1153 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 ZNF438Q7Z4V0 828 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 PDZD3Q86UT5 571 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 SFTPA2Q8IWL1 248 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 RBM12BQ8IXT5 1001 aaKnown RBP18.76■□□□□ 0.59
DDX39A-204ENST00000586558 KRT222Q8N1A0 295 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 LILRA3Q8N6C8 439 aaPredicted RBP18.76■□□□□ 0.59
DDX39A-204ENST00000586558 LKAAEAR1Q8TD35 194 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 FBF1Q8TES7 1133 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 SH3KBP1Q96B97 665 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 AARSD1Q9BTE6 412 aaKnown RBP18.76■□□□□ 0.59
DDX39A-204ENST00000586558 FUT8Q9BYC5 575 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 WWP1Q9H0M0 922 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 OR52A5Q9H2C5 316 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 LATS2Q9NRM7 1088 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 POT1Q9NUX5 634 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 TXNDC16Q9P2K2 825 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 SLC17A6Q9P2U8 582 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 CPNE7Q9UBL6 633 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 PSMD13Q9UNM6 376 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 WDR37Q9Y2I8 494 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 HEBP2Q9Y5Z4 205 aa18.76■□□□□ 0.59
DDX39A-204ENST00000586558 SPAARA0A1B0GVQ0 90 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 RHPN2P1A8MT19 583 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 IFRD1O00458 451 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-204ENST00000586558 ZW10O43264 779 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 NIPSNAP2O75323 286 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 GPC4O75487 556 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 RFPL3O75679 317 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 ITGB6P18564 788 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 CHRM3P20309 590 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 GPR3P46089 330 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 PREPP48147 710 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 UBE2IP63279 158 aaKnown RBP18.75■□□□□ 0.59
DDX39A-204ENST00000586558 HHEXQ03014 270 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 RPE65Q16518 533 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-204ENST00000586558 CAPRIN2Q6IMN6 1127 aaKnown RBP18.75■□□□□ 0.59
DDX39A-204ENST00000586558 WDR93Q6P2C0 686 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 EFL1Q7Z2Z2 1120 aaKnown RBP18.75■□□□□ 0.59
DDX39A-204ENST00000586558 STRA8Q7Z7C7 330 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 TRIM48Q8IWZ4 208 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 SLC22A15Q8IZD6 547 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 IFI44Q8TCB0 444 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 CXorf40BQ96DE9 158 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 RMDN2Q96LZ7 410 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 CYTH2Q99418 400 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 CPNE1Q99829 537 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 SMYD2Q9NRG4 433 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 SCHIP1Q9P0W5 487 aaPredicted RBP18.75■□□□□ 0.59
DDX39A-204ENST00000586558 LRIT1Q9P2V4 623 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 PSAT1Q9Y617 370 aa18.75■□□□□ 0.59
DDX39A-204ENST00000586558 CNOT1A5YKK6 2376 aaKnown RBP18.75■□□□□ 0.59
DDX39A-204ENST00000586558 OR52A4PA6NMU1 304 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 GIPC1O14908 333 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 VPS26AO75436 327 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 DKK1O94907 266 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 SLCO2B1O94956 709 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 TUBBP07437 444 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 F7P08709 466 aaPredicted RBP18.74■□□□□ 0.59
DDX39A-204ENST00000586558 FAM153BP0C7A2 387 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 FTH1P19P0C7X4 201 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 MYBL2P10244 700 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 MTHFD1P11586 935 aaKnown RBP18.74■□□□□ 0.59
DDX39A-204ENST00000586558 MYF5P13349 255 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 CD9P21926 228 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 NDUFS1P28331 727 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 ATP5DP30049 168 aa18.74■□□□□ 0.59
DDX39A-204ENST00000586558 SKIV2L2P42285 1042 aaKnown RBP18.74■□□□□ 0.59
DDX39A-204ENST00000586558 CSE1LP55060 971 aaKnown RBP18.74■□□□□ 0.59
DDX39A-204ENST00000586558 HSPA14Q0VDF9 509 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms