RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 CPNE9Q8IYJ1 553 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 CLYBLQ8N0X4 340 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 PTGR2Q8N8N7 351 aaPredicted RBP10.23□□□□□ -0.77
LIG3-203ENST00000585370 DDHD1Q8NEL9 900 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 BTN2A2Q8WVV5 523 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 KLHL29Q96CT2 875 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 COQ10AQ96MF6 247 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 TMEM237Q96Q45 408 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 RAB3IPQ96QF0 476 aaPredicted RBP10.23□□□□□ -0.77
LIG3-203ENST00000585370 P2RY13Q9BPV8 354 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 RTKNQ9BST9 563 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 BOCQ9BWV1 1114 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 UNKQ9C0B0 810 aaKnown RBP10.23□□□□□ -0.77
LIG3-203ENST00000585370 ABCG8Q9H221 673 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 MTG2Q9H4K7 406 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 RDH14Q9HBH5 336 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 FBRSL1Q9HCM7 1045 aaKnown RBP10.23□□□□□ -0.77
LIG3-203ENST00000585370 SARS2Q9NP81 518 aaKnown RBP10.23□□□□□ -0.77
LIG3-203ENST00000585370 SEMA4GQ9NTN9 838 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 GALPQ9UBC7 116 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 ZDHHC2Q9UIJ5 367 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 STON1Q9Y6Q2 735 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 CFAP47Q6ZTR5 3102 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 ASPMQ8IZT6 3477 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 ZNF106Q9H2Y7 1883 aaKnown RBP10.22□□□□□ -0.77
LIG3-203ENST00000585370 NEMP2A6NFY4 417 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 UBXN8O00124 270 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 CDC7O00311 574 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 TSPAN6O43657 245 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 SYNCRIPO60506 623 aaKnown RBP10.22□□□□□ -0.77
LIG3-203ENST00000585370 DIAPH2O60879 1101 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 LRP3O75074 770 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 FTH1P02794 183 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 CHRNGP07510 517 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 ENO2P09104 434 aaPredicted RBP10.22□□□□□ -0.77
LIG3-203ENST00000585370 ESRRAP11474 423 aaPredicted RBP10.22□□□□□ -0.77
LIG3-203ENST00000585370 HLA-EP13747 358 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 ADRB3P13945 408 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 C5AR1P21730 350 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 MPSTP25325 297 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 AOAHP28039 575 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 PTPN4P29074 926 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 PRDX6P30041 224 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 AKT1P31749 480 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 IL12RB1P42701 662 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 LIG3P49916 1009 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 GALK1P51570 392 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 NCALDP61601 193 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 SFSWAPQ12872 951 aaKnown RBP10.22□□□□□ -0.77
LIG3-203ENST00000585370 CAMK2GQ13555 558 aaPredicted RBP10.22□□□□□ -0.77
LIG3-203ENST00000585370 PCBP2Q15366 365 aaKnown RBP eCLIP10.22□□□□□ -0.77
LIG3-203ENST00000585370 CSRP2Q16527 193 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 PFKFB4Q16877 469 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 FRA10AC1Q70Z53 315 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 ASRGL1Q7L266 308 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 TRMT11Q7Z4G4 463 aaKnown RBP10.22□□□□□ -0.77
LIG3-203ENST00000585370 CUZD1Q86UP6 607 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 FAM160A2Q8N612 972 aaPredicted RBP10.22□□□□□ -0.77
LIG3-203ENST00000585370 CEP70Q8NHQ1 597 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 GIMAP7Q8NHV1 300 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 ACTRT2Q8TDY3 377 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 GLYATL1Q969I3 302 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 ARRDC3Q96B67 414 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 AP2M1Q96CW1 435 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 DTD2Q96FN9 168 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 SLC30A3Q99726 388 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 CCT7Q99832 543 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 RIOK2Q9BVS4 552 aaKnown RBP10.22□□□□□ -0.77
LIG3-203ENST00000585370 TRIM54Q9BYV2 358 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 ZCCHC2Q9C0B9 1178 aaKnown RBP10.22□□□□□ -0.77
LIG3-203ENST00000585370 NMUR2Q9GZQ4 415 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 LRMDAQ9H2I8 198 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 GSTO2Q9H4Y5 243 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 CYP4F12Q9HCS2 524 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 TCF7L2Q9NQB0 619 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 CD274Q9NZQ7 290 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 SARDHQ9UL12 918 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 CDYLQ9Y232 598 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 TRAF6Q9Y4K3 522 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 OARD1Q9Y530 152 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 PRSS21Q9Y6M0 314 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 CAPN7Q9Y6W3 813 aa10.22□□□□□ -0.77
LIG3-203ENST00000585370 KMT2BQ9UMN6 2715 aaPredicted RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 SPAG17Q6Q759 2223 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 MAP1BP46821 2468 aaKnown RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 PABPN1LA6NDY0 278 aaKnown RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 NPEPPSL1A6NEC2 478 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 IQCF5A8MTL0 148 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 CAPN14A8MX76 684 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 NEMP1O14524 444 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 GIPC1O14908 333 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 GRID2O43424 1007 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 NUAK1O60285 661 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 LZTS3O60299 673 aaPredicted RBP10.21□□□□□ -0.77
LIG3-203ENST00000585370 GDF9O60383 454 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 VPS4BO75351 444 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 EGFP01133 1207 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 C8GP07360 202 aa10.21□□□□□ -0.77
LIG3-203ENST00000585370 RPS17P08708 135 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms