RNA–Protein interactions for RNA: ENST00000584684.1

ERBB2-220, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-220ENST00000584684 INSM2Q96T92 566 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-220ENST00000584684 CD180Q99467 661 aa12.86□□□□□ -0.35
ERBB2-220ENST00000584684 WWP1Q9H0M0 922 aa12.86□□□□□ -0.35
ERBB2-220ENST00000584684 KIR3DX1Q9H7L2 352 aa12.86□□□□□ -0.35
ERBB2-220ENST00000584684 CASS4Q9NQ75 786 aa12.86□□□□□ -0.35
ERBB2-220ENST00000584684 HOMER3Q9NSC5 361 aa12.86□□□□□ -0.35
ERBB2-220ENST00000584684 IMP3Q9NV31 184 aaKnown RBP12.86□□□□□ -0.35
ERBB2-220ENST00000584684 PIH1D1Q9NWS0 290 aaKnown RBP12.86□□□□□ -0.35
ERBB2-220ENST00000584684 PILRAQ9UKJ1 303 aa12.86□□□□□ -0.35
ERBB2-220ENST00000584684 TMEM184BQ9Y519 407 aaPredicted RBP12.86□□□□□ -0.35
ERBB2-220ENST00000584684 HEBP2Q9Y5Z4 205 aa12.86□□□□□ -0.35
ERBB2-220ENST00000584684 SPTA1P02549 2419 aa12.86□□□□□ -0.35
ERBB2-220ENST00000584684 A8MU76 341 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 APRTP07741 180 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 MSNP26038 577 aaKnown RBP12.85□□□□□ -0.35
ERBB2-220ENST00000584684 NDUFS1P28331 727 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 FOXN2P32314 431 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 NSG1P42857 185 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 LEPRP48357 1165 aaKnown RBP12.85□□□□□ -0.35
ERBB2-220ENST00000584684 CD151P48509 253 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 CDKN1CP49918 316 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-220ENST00000584684 SNX1Q13596 522 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 DBN1Q16643 649 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 MANEAQ5SRI9 462 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 AFTPHQ6ULP2 937 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 PPP1R21Q6ZMI0 780 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 NLRP9Q7RTR0 991 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 CARFQ8N187 725 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 TAB3Q8N5C8 712 aaPredicted RBP12.85□□□□□ -0.35
ERBB2-220ENST00000584684 GLIS1Q8NBF1 620 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 UBXN4Q92575 508 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 NKD1Q969G9 470 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 C12orf66Q96MD2 445 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 TGM7Q96PF1 710 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 OR52A5Q9H2C5 316 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 FAM96AQ9H5X1 160 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 COG4Q9H9E3 785 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 KLHL3Q9UH77 587 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 SLC24A2Q9UI40 661 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 PCDHGA4Q9Y5G9 962 aa12.85□□□□□ -0.35
ERBB2-220ENST00000584684 BOD1L1Q8NFC6 3051 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 OR5K3A6NET4 321 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 GOLGA6L3A6NEY3 463 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 AP3B1O00203 1094 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 POLR1CO15160 346 aaPredicted RBP12.84□□□□□ -0.35
ERBB2-220ENST00000584684 DLGAP3O95886 979 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 ITGB2P05107 769 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 NELFEP18615 380 aaKnown RBP12.84□□□□□ -0.35
ERBB2-220ENST00000584684 ADRA1DP25100 572 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 RPL22P35268 128 aaKnown RBP12.84□□□□□ -0.35
ERBB2-220ENST00000584684 GRIA1P42261 906 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 LMAN1P49257 510 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 MAP7Q14244 749 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 IL11RAQ14626 422 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 PLCL1Q15111 1095 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 CCDC38Q502W7 563 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 TSTD2Q5T7W7 516 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 LYPLAL1Q5VWZ2 237 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 CYB5D1Q6P9G0 228 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 CERS6Q6ZMG9 384 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 TAS2R42Q7RTR8 314 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 VASH2Q86V25 355 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 KMT5CQ86Y97 462 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 LILRA3Q8N6C8 439 aaPredicted RBP12.84□□□□□ -0.35
ERBB2-220ENST00000584684 SPDYE1Q8NFV5 336 aaPredicted RBP12.84□□□□□ -0.35
ERBB2-220ENST00000584684 NAT14Q8WUY8 206 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 SLC39A7Q92504 469 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.84□□□□□ -0.35
ERBB2-220ENST00000584684 SLC41A2Q96JW4 573 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 TRIT1Q9H3H1 467 aaKnown RBP12.84□□□□□ -0.35
ERBB2-220ENST00000584684 TCAF1Q9Y4C2 921 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 COLEC10Q9Y6Z7 277 aa12.84□□□□□ -0.35
ERBB2-220ENST00000584684 CCDC162PA2VCL2 907 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 TLCD2A6NGC4 264 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 EIF4E1BA6NMX2 242 aaKnown RBP12.83□□□□□ -0.36
ERBB2-220ENST00000584684 MATN2O00339 956 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 KIF1CO43896 1103 aaKnown RBP12.83□□□□□ -0.36
ERBB2-220ENST00000584684 CEP104O60308 925 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 RAD1O60671 282 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 RASSF9O75901 435 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 FTH1P02794 183 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 PRSS56P0CW18 603 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 ETS1P14921 441 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 MAP4P27816 1152 aaKnown RBP12.83□□□□□ -0.36
ERBB2-220ENST00000584684 CDK16Q00536 496 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 SRSF6Q13247 344 aaKnown RBP12.83□□□□□ -0.36
ERBB2-220ENST00000584684 CACHD1Q5VU97 1274 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 ARMC3Q5W041 872 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 IRGCQ6NXR0 463 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 DUS1LQ6P1R4 473 aaKnown RBP12.83□□□□□ -0.36
ERBB2-220ENST00000584684 PRUNE1Q86TP1 453 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 OOSP2Q86WS3 158 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 CFAP206Q8IYR0 622 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 CACNA2D3Q8IZS8 1091 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 NLGN4XQ8N0W4 816 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 RASGEF1CQ8N431 466 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 CLDN19Q8N6F1 224 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 ZSCAN1Q8NBB4 408 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 ACVR1CQ8NER5 493 aa12.83□□□□□ -0.36
ERBB2-220ENST00000584684 NLGN4YQ8NFZ3 816 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms