RNA–Protein interactions for RNA: ENST00000579539.1

DDX42-210, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-210ENST00000579539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.8□□□□□ -1.48
DDX42-210ENST00000579539 CSNK1G3Q9Y6M4 447 aa5.8□□□□□ -1.48
DDX42-210ENST00000579539 NWD1Q149M9 1564 aa5.8□□□□□ -1.48
DDX42-210ENST00000579539 TIAM2Q8IVF5 1701 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 NWD2Q9ULI1 1742 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 LMO7Q8WWI1 1683 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 ARPC4-TTLL3A0A0A6YYG9 625 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 CLRN2A0PK11 232 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 DENND3A2RUS2 1198 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 PGPEP1LA6NFU8 196 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 KRTAP9-7A8MTY7 169 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 H0Y626 953 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 PSMD11O00231 422 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 ACOT8O14734 319 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 PCDH17O14917 1159 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 GRM6O15303 877 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 AVILO75366 819 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 AKAP3O75969 853 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 ACTL6BO94805 426 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 TRIM16O95361 564 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 HMGN1P05114 100 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 MPOP05164 745 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 JUNP05412 331 aaKnown RBP5.79□□□□□ -1.48
DDX42-210ENST00000579539 S100A6P06703 90 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 TFPTP0C1Z6 253 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 DLATP10515 647 aaKnown RBP5.79□□□□□ -1.48
DDX42-210ENST00000579539 STMN1P16949 149 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 GSTM2P28161 218 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 NSFP46459 744 aaKnown RBP5.79□□□□□ -1.48
DDX42-210ENST00000579539 OR3A3P47888 321 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 CPA2P48052 419 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 SLC11A2P49281 568 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 HARS2P49590 506 aaKnown RBP5.79□□□□□ -1.48
DDX42-210ENST00000579539 MAN2A2P49641 1150 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 ETV1P50549 477 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 ARSEP51690 589 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 STAT5BP51692 787 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 NAPAP54920 295 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 TPTEP56180 551 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 WNT3AP56704 352 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 DSTNP60981 165 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 ZNF45Q02386 682 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 UBE3AQ05086 875 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 GAD2Q05329 585 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 MERTKQ12866 999 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 BFSP1Q12934 665 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 BNIP2Q12982 314 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 GPS1Q13098 491 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 KLF10Q13118 480 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 NFE2L1Q14494 772 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 SQLEQ14534 574 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 SSPNQ14714 243 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 RTP5Q14D33 572 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 DLG2Q15700 870 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 CHI3L2Q15782 390 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 NPTX1Q15818 432 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 SLC36A3Q495N2 470 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 CCDC58Q4VC31 144 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 FAM47AQ5JRC9 791 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 FGD3Q5JSP0 725 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 PRAMEF14Q5SWL7 426 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 RAP1GAP2Q684P5 730 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 PDPK2PQ6A1A2 396 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 CRTC1Q6UUV9 634 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 MAMDC4Q6UXC1 1216 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 OTOP2Q7RTS6 562 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 PRUNE1Q86TP1 453 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 ARHGEF19Q8IW93 802 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 CCDC60Q8IWA6 550 aaPredicted RBP5.79□□□□□ -1.48
DDX42-210ENST00000579539 SP8Q8IXZ3 490 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 ADGRF2Q8IZF7 708 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 PARP8Q8N3A8 854 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 MPP5Q8N3R9 675 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 SLC25A41Q8N5S1 370 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 NATD1Q8N6N6 113 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 DNAJC5GQ8N7S2 189 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 ABHD11Q8NFV4 315 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 LHFPL5Q8TAF8 219 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 TBCKQ8TEA7 893 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 SH3RF3Q8TEJ3 882 aaPredicted RBP5.79□□□□□ -1.48
DDX42-210ENST00000579539 PHF10Q8WUB8 498 aaKnown RBP5.79□□□□□ -1.48
DDX42-210ENST00000579539 HSPH1Q92598 858 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 SEPT8Q92599 483 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 SLC45A3Q96JT2 553 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 CEP295NLQ96MC4 621 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 ZNF560Q96MR9 790 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 RPRD1AQ96P16 312 aaPredicted RBP5.79□□□□□ -1.48
DDX42-210ENST00000579539 CPXM1Q96SM3 734 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 PKP2Q99959 881 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 TREX2Q9BQ50 279 aaPredicted RBP5.79□□□□□ -1.48
DDX42-210ENST00000579539 SH2D3AQ9BRG2 576 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 TMEM121Q9BTD3 319 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 DCUN1D5Q9BTE7 237 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 NYXQ9GZU5 481 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 UPF3AQ9H1J1 476 aaKnown RBP5.79□□□□□ -1.48
DDX42-210ENST00000579539 VPS33BQ9H267 617 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 KCNN2Q9H2S1 579 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 SNX25Q9H3E2 840 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 MUC13Q9H3R2 512 aa5.79□□□□□ -1.48
DDX42-210ENST00000579539 COPS7BQ9H9Q2 264 aaPredicted RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms