RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PRR23BQ6ZRT6 265 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC38A2Q96QD8 506 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 XYLT2Q9H1B5 865 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 NEK6Q9HC98 313 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 SMPD4Q9NXE4 827 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 ZNF224Q9NZL3 707 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 RIMS3Q9UJD0 308 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 RWDD3Q9Y3V2 267 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 PCDHB9Q9Y5E1 797 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 PPP2R3BQ9Y5P8 575 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 XPNPEP2O43895 674 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 TRBC1P01850 177 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 RHOQP17081 205 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 TUBA3EQ6PEY2 450 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 DOK6Q6PKX4 331 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 TRIM8Q9BZR9 551 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 SPON1Q9HCB6 807 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 ERVK-11Q9UQG0 969 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 LYVE1Q9Y5Y7 322 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 ANKRD12Q6UB98 2062 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 ANKDD1BA6NHY2 528 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 ACOX3O15254 700 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 PSEN2P49810 448 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 MON1AQ86VX9 555 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 ALDH16A1Q8IZ83 802 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 CLIP4Q8N3C7 705 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 ABHD11Q8NFV4 315 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 TEFMQ96QE5 360 aaKnown RBP12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 TSPAN18Q96SJ8 248 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 FUNDC2Q9BWH2 189 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 MMP27Q9H306 513 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 GALPQ9UBC7 116 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 FER1L4A9Z1Z3 1794 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 ALDH1A2O94788 518 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 STAT5AP42229 794 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 PGGT1BP53609 377 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 CDH12P55289 794 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 HUNKP57058 714 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 LILRA4P59901 499 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 SDHAF4Q5VUM1 108 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 SDE2Q6IQ49 451 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 FAM151BQ6UXP7 276 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 TMEM135Q86UB9 458 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 CMTR2Q8IYT2 770 aaKnown RBP12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 RTL3Q8N8U3 475 aaKnown RBP12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 GOLM1Q8NBJ4 401 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 C11orf65Q8NCR3 313 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 GINS4Q9BRT9 223 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC22A4Q9H015 551 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 CRYBG1Q9Y4K1 1723 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 PCDHB1Q9Y5F3 818 aa12.94□□□□□ -0.34
PCDHGB3-201ENST00000576222 OR6C70A6NIJ9 312 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 SGTAO43765 313 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC35E2BP0CK96 405 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 DNAJA1P31689 397 aaKnown RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 HCAR3P49019 387 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 ATP12AP54707 1039 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 DIO3P55073 304 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 RPS14P62263 151 aaKnown RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 OR2T5Q6IEZ7 315 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 NANOGP8Q6NSW7 305 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 PIM3Q86V86 326 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 CDK20Q8IZL9 346 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 OR2T29Q8NH02 315 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 BRSK1Q8TDC3 778 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 RTP4Q96DX8 246 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 TM6SF2Q9BZW4 377 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 MED28Q9H204 178 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 NANOGQ9H9S0 305 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 GIT1Q9Y2X7 761 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 FADS2P1A8MWK0 482 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 CLDN9O95484 217 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 PRPS2P11908 318 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 CTPS1P17812 591 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 VARSP26640 1264 aaKnown RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 RABGGTBP53611 331 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 TAF1CQ15572 869 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 ZNF678Q5SXM1 525 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 HACD2Q6Y1H2 254 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 TSPEARQ8WU66 669 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 MRPL48Q96GC5 212 aaKnown RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 MAGEB10Q96LZ2 347 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 CDK15Q96Q40 435 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 KCNA7Q96RP8 456 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 C20orf27Q9GZN8 174 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 MFSD1Q9H3U5 465 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 CMTM6Q9NX76 183 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 VPS51Q9UID3 782 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 PCDHGA7Q9Y5G6 932 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 NUP188Q5SRE5 1749 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 TIAM2Q8IVF5 1701 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 ISPDA4D126 451 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 ANKRD33BA6NCL7 494 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 G3V2L1 256 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 ORC5O43913 435 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 MPZL2O60487 215 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 SLC25A14O95258 325 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 HLA-DQB2P05538 268 aa12.93□□□□□ -0.34
PCDHGB3-201ENST00000576222 CKMP06732 381 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms