RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 PLD2O14939 933 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 TLX3O43711 291 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-216ENST00000575599 AVILO75366 819 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 TNFSF15O95150 251 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 POLBP06746 335 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 TUBBP07437 444 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 SLC35G4P0C7Q5 338 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 JMJD7P0C870 316 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 NMBRP28336 390 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 MAGEA6P43360 314 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 NPY2RP49146 381 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 EPHA4P54764 986 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 CFHR1Q03591 330 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 ACVR1Q04771 509 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 CALCOCO2Q13137 446 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 EIF3IQ13347 325 aaKnown RBP12.98□□□□□ -0.33
RPAIN-216ENST00000575599 ITIH4Q14624 930 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 RPE65Q16518 533 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 CLPPQ16740 277 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-216ENST00000575599 FASTKD1Q53R41 847 aaKnown RBP12.98□□□□□ -0.33
RPAIN-216ENST00000575599 SNAP47Q5SQN1 464 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 METRNLQ641Q3 311 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 ZNF574Q6ZN55 896 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-216ENST00000575599 TMEM26Q6ZUK4 368 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 LILRA3Q8N6C8 439 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-216ENST00000575599 BBOF1Q8ND07 529 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 OR4D9Q8NGE8 314 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 GPR150Q8NGU9 434 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 OR4L1Q8NH43 312 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 HM13Q8TCT9 377 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 NCSTNQ92542 709 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 PEX13Q92968 403 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 LINC00615Q96LM1 132 aaPredicted RBP12.98□□□□□ -0.33
RPAIN-216ENST00000575599 DPH5Q9H2P9 285 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 VPS37BQ9H9H4 285 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 FAM114A2Q9NRY5 505 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 PISDQ9UG56 409 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 NEU2Q9Y3R4 380 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 PCDHGA8Q9Y5G5 932 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 PRSS21Q9Y6M0 314 aa12.98□□□□□ -0.33
RPAIN-216ENST00000575599 KLHL33A6NCF5 533 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 OR1I1O60431 355 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 TYRP1P17643 537 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 ITIH1P19827 911 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 NSG1P42857 185 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 LIMK2P53671 638 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 GPR18Q14330 331 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 SEMA3AQ14563 771 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 C16orf72Q14CZ0 275 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 DUS1LQ6P1R4 473 aaKnown RBP12.97□□□□□ -0.33
RPAIN-216ENST00000575599 CASC4Q6P4E1 433 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 TMEM71Q6P5X7 295 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 CES3Q6UWW8 571 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 LDB1Q86U70 411 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-216ENST00000575599 OTUD6BQ8N6M0 293 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 JPH3Q8WXH2 748 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-216ENST00000575599 IFT81Q8WYA0 676 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 FGF11Q92914 225 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 SNF8Q96H20 258 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 PRR11Q96HE9 360 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-216ENST00000575599 C12orf66Q96MD2 445 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 ZNF578Q96N58 590 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-216ENST00000575599 TTC1Q99614 292 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 CMKLR1Q99788 373 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 DPYSL5Q9BPU6 564 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 CCM2Q9BSQ5 444 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 COG4Q9H9E3 785 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 UCK1Q9HA47 277 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 SLC40A1Q9NP59 571 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 ASCL3Q9NQ33 180 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 THSD1Q9NS62 852 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 TREX1Q9NSU2 369 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 CATSPERZQ9NTU4 200 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 AKAP7Q9P0M2 348 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-216ENST00000575599 KLHL3Q9UH77 587 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 ANAPC5Q9UJX4 755 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 ACSL5Q9ULC5 683 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 SNX24Q9Y343 169 aa12.97□□□□□ -0.33
RPAIN-216ENST00000575599 UQCRHLA0A096LP55 91 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 A8MU76 341 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 DXOO77932 396 aaKnown RBP12.96□□□□□ -0.33
RPAIN-216ENST00000575599 UBXN7O94888 489 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 AP2A2O94973 939 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 UQCRHP07919 91 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 THRAP10827 490 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 MTHFD1P11586 935 aaKnown RBP12.96□□□□□ -0.33
RPAIN-216ENST00000575599 AMD1P17707 334 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 SQSTM1Q13501 440 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 PLCL1Q15111 1095 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 AARS2Q5JTZ9 985 aaKnown RBP12.96□□□□□ -0.33
RPAIN-216ENST00000575599 LYPLAL1Q5VWZ2 237 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 XKR5Q6UX68 686 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 PACS1Q6VY07 963 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 PCGF5Q86SE9 256 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 CAND1Q86VP6 1230 aaKnown RBP12.96□□□□□ -0.33
RPAIN-216ENST00000575599 RBM12BQ8IXT5 1001 aaKnown RBP12.96□□□□□ -0.33
RPAIN-216ENST00000575599 MPP5Q8N3R9 675 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 MFSD3Q96ES6 412 aa12.96□□□□□ -0.33
RPAIN-216ENST00000575599 NAF1Q96HR8 494 aaKnown RBP12.96□□□□□ -0.33
RPAIN-216ENST00000575599 RMDN2Q96LZ7 410 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms