RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CRYMQ14894 314 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 NR1D2Q14995 579 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 SMAD1Q15797 465 aaKnown RBP10.81□□□□□ -0.68
CHD3-216ENST00000573936 CLPPQ16740 277 aaPredicted RBP10.81□□□□□ -0.68
CHD3-216ENST00000573936 TYSND1Q2T9J0 566 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 MSS51Q4VC12 460 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 PERM1Q5SV97 790 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 PTRHD1Q6GMV3 140 aaKnown RBP10.81□□□□□ -0.68
CHD3-216ENST00000573936 CEP128Q6ZU80 1094 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 TMPRSS7Q7RTY8 843 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 ZNF438Q7Z4V0 828 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 KCNMB4Q86W47 210 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 CILP2Q8IUL8 1156 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 AGGF1Q8N302 714 aaeCLIP10.81□□□□□ -0.68
CHD3-216ENST00000573936 CLDN19Q8N6F1 224 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 SLC37A2Q8TED4 501 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 CXorf40BQ96DE9 158 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 DCBLD2Q96PD2 775 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 PANX3Q96QZ0 392 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 SLC38A3Q99624 504 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 LRRN3Q9H3W5 708 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 UCK1Q9HA47 277 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 FAM114A2Q9NRY5 505 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 POT1Q9NUX5 634 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 GRHL1Q9NZI5 618 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 MARCH4Q9P2E8 410 aaPredicted RBP10.81□□□□□ -0.68
CHD3-216ENST00000573936 CPNE7Q9UBL6 633 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 ZC3H7BQ9UGR2 993 aaKnown RBP10.81□□□□□ -0.68
CHD3-216ENST00000573936 PCDHB1Q9Y5F3 818 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 HEBP2Q9Y5Z4 205 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 TEX264Q9Y6I9 313 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 PRSS21Q9Y6M0 314 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 MYLKQ15746 1914 aa10.81□□□□□ -0.68
CHD3-216ENST00000573936 UBA6A0AVT1 1052 aaPredicted RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 FAM149AA5PLN7 773 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 GOLGA8KD6RF30 607 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 GOLGA8TH3BQL2 631 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 TMX2-CTNND1H3BSU7 103 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 IFRD1O00458 451 aaPredicted RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 PPM1DO15297 605 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 TP73O15350 636 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 OR1I1O60431 355 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 SLU7O95391 586 aaKnown RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 EML2O95834 649 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 MT-CO3P00414 261 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 ESR1P03372 595 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 SLC35G4P0C7Q5 338 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 JUPP14923 745 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 BRAFP15056 766 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 RPL10P27635 214 aaKnown RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 NDUFS1P28331 727 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 SLC19A1P41440 591 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 CD151P48509 253 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 PLTPP55058 493 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 UBE2IP63279 158 aaKnown RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 GPLD1P80108 840 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 INSM1Q01101 510 aaPredicted RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 SLC7A5Q01650 507 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 GUCY2DQ02846 1103 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 FRG1Q14331 258 aaKnown RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 CLCA4Q14CN2 919 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 SEPT7Q16181 437 aaKnown RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 LRRC69Q6ZNQ3 347 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 FAM83HQ6ZRV2 1179 aaPredicted RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 MICALCLQ6ZW33 695 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 LDB1Q86U70 411 aaPredicted RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 FBXO36Q8NEA4 188 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 PYROXD1Q8WU10 500 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 ZFPM2Q8WW38 1151 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 PATE1Q8WXA2 126 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 SEC14L1Q92503 715 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 ELMO1Q92556 727 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 GRAMD1AQ96CP6 724 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 CCDC97Q96F63 343 aaPredicted RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 AHCYL2Q96HN2 611 aaKnown RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 PWWP2AQ96N64 755 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 DEPDC7Q96QD5 511 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 GFM1Q96RP9 751 aaKnown RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 DPYSL5Q9BPU6 564 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 TRIM56Q9BRZ2 755 aaKnown RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 P2RY12Q9H244 342 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 EPB41L1Q9H4G0 881 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 COG4Q9H9E3 785 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 EPB41L5Q9HCM4 733 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 SCHIP1Q9P0W5 487 aaPredicted RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 DKK4Q9UBT3 224 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 CHMP2BQ9UQN3 213 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 COLEC10Q9Y6Z7 277 aa10.8□□□□□ -0.68
CHD3-216ENST00000573936 URB1O60287 2271 aaKnown RBP10.8□□□□□ -0.68
CHD3-216ENST00000573936 NTN3O00634 580 aaPredicted RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 BANF1O75531 89 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 S1PR4O95977 384 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 RPLP0P05388 317 aaKnown RBP10.79□□□□□ -0.68
CHD3-216ENST00000573936 GSTA2P09210 222 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 ALDH4A1P30038 563 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 FMO4P31512 558 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 ABCG1P45844 678 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 EPHA4P54764 986 aa10.79□□□□□ -0.68
CHD3-216ENST00000573936 EIF3BP55884 814 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms