RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 MAP4P27816 1152 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 CXCR5P32302 372 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 PRLHRP49683 370 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 ARL4DP49703 201 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 OASLQ15646 514 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 KCTD19Q17RG1 926 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 CCDC38Q502W7 563 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 DNTTIP2Q5QJE6 756 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 ARMC6Q6NXE6 501 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 PRSS42Q7Z5A4 293 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 UNC5BQ8IZJ1 945 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 CCDC89Q8N998 374 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 TRIM58Q8NG06 486 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 HM13Q8TCT9 377 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 STYXQ8WUJ0 223 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 CDKN2AIPNLQ96HQ2 116 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 LINC00615Q96LM1 132 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 ULBP3Q9BZM4 244 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 KCNF1Q9H3M0 494 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 VPS37BQ9H9H4 285 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 GPN2Q9H9Y4 310 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 ETNK1Q9HBU6 452 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 HRASLS2Q9NWW9 162 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 SIDT1Q9NXL6 827 aaKnown RBP12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 PTPRQQ9UMZ3 2332 aa12.41□□□□□ -0.42
NPLOC4-213ENST00000573519 UBA6A0AVT1 1052 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 OR6C74A6NCV1 312 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 OR5K3A6NET4 321 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 OR51F1A6NGY5 319 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 H7C0S8 307 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 CEP104O60308 925 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 FGGP02679 453 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 ITGB2P05107 769 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 FDFT1P37268 417 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 ARCN1P48444 511 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 CACNG1Q06432 222 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 CDH17Q12864 832 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 SIX1Q15475 284 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 LINC00303Q3SY05 128 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 ZNF449Q6P9G9 518 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 TIPARPQ7Z3E1 657 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 ZNF605Q86T29 641 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 OOSP2Q86WS3 158 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 CLDN19Q8N6F1 224 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 SIDT2Q8NBJ9 832 aaKnown RBP12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 UBE2Q2Q8WVN8 375 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 MED8Q96G25 268 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 RMDN2Q96LZ7 410 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 FERD3LQ96RJ6 166 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 C19orf43Q9BQ61 176 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 CCM2Q9BSQ5 444 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 RAB33BQ9H082 229 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 RAB6BQ9NRW1 208 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 SMARCAL1Q9NZC9 954 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 EPHA6Q9UF33 1036 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 SLC24A2Q9UI40 661 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 COLEC10Q9Y6Z7 277 aa12.4□□□□□ -0.42
NPLOC4-213ENST00000573519 IGHV5-51A0A0C4DH38 117 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 LOC101059948A0A1B0GTJ6 334 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 ERI2A8K979 691 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 ZNF891A8MT65 544 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 IFRD1O00458 451 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 KIAA0754O94854 1291 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 FAM87AP0C7U9 286 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 ZSCAN5DPP0CG00 497 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 ZNF28P17035 718 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 NELFEP18615 380 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 MSNP26038 577 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 IL11RAQ14626 422 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 KCNAB1Q14722 419 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 DBN1Q16643 649 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 TBR1Q16650 682 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 SKIDA1Q1XH10 827 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 CYB5D1Q6P9G0 228 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 XKR5Q6UX68 686 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 GSTA5Q7RTV2 222 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 REXO1L1PQ8IX06 675 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 PIANPQ8IYJ0 282 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 GLIS1Q8NBF1 620 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 OR4E2Q8NGC2 313 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 KLHL6Q8WZ60 621 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 UBXN4Q92575 508 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 STAMBPL1Q96FJ0 436 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 MAP3K3Q99759 626 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 SLC12A9Q9BXP2 914 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 SPRY4Q9C004 299 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 TRIT1Q9H3H1 467 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 KIR3DX1Q9H7L2 352 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 COG4Q9H9E3 785 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 TRMT1Q9NXH9 659 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 PAK5Q9P286 719 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 LNPEPQ9UIQ6 1025 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 TMEM184BQ9Y519 407 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 HEBP2Q9Y5Z4 205 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 SDK2Q58EX2 2172 aa12.39□□□□□ -0.43
NPLOC4-213ENST00000573519 IGLV3-16A0A075B6K0 115 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 TRBV5-4A0A0C4DH59 114 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 C17orf113A0A1B0GUU1 675 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 HEATR9A2RTY3 570 aa12.38□□□□□ -0.43
NPLOC4-213ENST00000573519 CCDC162PA2VCL2 907 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms