RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 MT-CO3P00414 261 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 POLBP06746 335 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 SLC35G4P0C7Q5 338 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 OR56A5P0C7T3 313 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 PNLIPP16233 465 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 ALDH4A1P30038 563 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 ELK3P41970 407 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 HALP42357 657 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 SLC1A2P43004 574 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 PREPP48147 710 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 PDX1P52945 283 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 BOP1Q14137 746 aaKnown RBP15.48■□□□□ 0.07
CHD3-215ENST00000572750 SPIDRQ14159 915 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 NR1D2Q14995 579 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 FASTKD3Q14CZ7 662 aaKnown RBP15.48■□□□□ 0.07
CHD3-215ENST00000572750 TRADDQ15628 312 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 LONRF1Q17RB8 773 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 TYSND1Q2T9J0 566 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 AMZ1Q400G9 498 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 CDCP2Q5VXM1 449 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 METRNLQ641Q3 311 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 NEPROQ6NW34 567 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 ABRAXAS1Q6UWZ7 409 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 WASH2PQ6VEQ5 465 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 NAPRTQ6XQN6 538 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 SLC9B2Q86UD5 537 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 TMPRSS12Q86WS5 348 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 LURAP1LQ8IV03 231 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 ANKMY2Q8IV38 441 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 CFAP206Q8IYR0 622 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 BBOF1Q8ND07 529 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 SPDYE1Q8NFV5 336 aaPredicted RBP15.48■□□□□ 0.07
CHD3-215ENST00000572750 MDM1Q8TC05 714 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 GFM1Q96RP9 751 aaKnown RBP15.48■□□□□ 0.07
CHD3-215ENST00000572750 LRRC1Q9BTT6 524 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 LRRN3Q9H3W5 708 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 PLAC1Q9HBJ0 212 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 WASH6PQ9NQA3 447 aa15.48■□□□□ 0.07
CHD3-215ENST00000572750 C20orf96Q9NUD7 363 aaPredicted RBP15.48■□□□□ 0.07
CHD3-215ENST00000572750 IMP3Q9NV31 184 aaKnown RBP15.48■□□□□ 0.07
CHD3-215ENST00000572750 ATXN7L1Q9ULK2 861 aaPredicted RBP15.48■□□□□ 0.07
CHD3-215ENST00000572750 CFAP20Q9Y6A4 193 aaKnown RBP15.48■□□□□ 0.07
CHD3-215ENST00000572750 CTAGE15A4D2H0 777 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 KLHL33A6NCF5 533 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 IQCF5A8MTL0 148 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 QSOX1O00391 747 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 NTN3O00634 580 aaPredicted RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 PRMT5O14744 637 aaPredicted RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 NDC80O14777 642 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 CSO75390 466 aaKnown RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 NDUFS3O75489 264 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 FTH1P02794 183 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 CTAGE8P0CG41 777 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 PLA2G2AP14555 144 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 JUPP14923 745 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 OGNP20774 298 aaKnown RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 PPARGP37231 505 aaPredicted RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 SLC19A1P41440 591 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 EIF3BP55884 814 aaKnown RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 PDIA2Q13087 525 aaKnown RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 TARDBPQ13148 414 aaKnown RBP eCLIP15.47■□□□□ 0.07
CHD3-215ENST00000572750 THOC5Q13769 683 aaKnown RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 TUBB2AQ13885 445 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 BRD3Q15059 726 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 RPE65Q16518 533 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 MAP9Q49MG5 647 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 SYTL3Q4VX76 610 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 RNF187Q5TA31 235 aaPredicted RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 NKAIN2Q5VXU1 208 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 RBM44Q6ZP01 1051 aaKnown RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 CTAGE6Q86UF2 777 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 KCNMB4Q86W47 210 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 CILP2Q8IUL8 1156 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 DENND6AQ8IWF6 608 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 CTAGE4Q8IX94 777 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 KRT222Q8N1A0 295 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 DCBLD1Q8N8Z6 715 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 MNS1Q8NEH6 495 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 ELMO1Q92556 727 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 LPGAT1Q92604 370 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 CXorf40BQ96DE9 158 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 DEPDC7Q96QD5 511 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 SLC38A3Q99624 504 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 TUBB2BQ9BVA1 445 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 ZMYND15Q9H091 742 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 P2RY12Q9H244 342 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 RDH14Q9HBH5 336 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 KCNK4Q9NYG8 393 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 ZC3H7BQ9UGR2 993 aaKnown RBP15.47■□□□□ 0.07
CHD3-215ENST00000572750 PCDHB1Q9Y5F3 818 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 TEX264Q9Y6I9 313 aa15.47■□□□□ 0.07
CHD3-215ENST00000572750 MGAQ8IWI9 3026 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 IGHV1OR21-1A0A087WYE8 117 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 C17orf113A0A1B0GUU1 675 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 EIF4E1BA6NMX2 242 aaKnown RBP15.46■□□□□ 0.07
CHD3-215ENST00000572750 B4GAT1O43505 415 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 TCEA3O75764 348 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 TTC4O95801 387 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 VIPP01282 170 aa15.46■□□□□ 0.07
CHD3-215ENST00000572750 MTHFD1P11586 935 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms