RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 SNX20Q7Z614 316 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 GALNT7Q86SF2 657 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 TDRPQ86YL5 185 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 DENND6AQ8IWF6 608 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 PELI3Q8N2H9 469 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 TRAM1L1Q8N609 369 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 PPM1NQ8N819 430 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 C2CD4AQ8NCU7 369 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-209ENST00000571558 CALML6Q8TD86 181 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 DCAKDQ8WVC6 231 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 SCG3Q8WXD2 468 aaKnown RBP13.55□□□□□ -0.24
RPAIN-209ENST00000571558 NUS1Q96E22 293 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 BMFQ96LC9 184 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 PAFAH2Q99487 392 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 BOCQ9BWV1 1114 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 SLC17A9Q9BYT1 436 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 ROPN1BQ9BZX4 212 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-209ENST00000571558 TRIM4Q9C037 500 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 FAM96AQ9H5X1 160 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 ROPN1Q9HAT0 212 aaPredicted RBP13.55□□□□□ -0.24
RPAIN-209ENST00000571558 SLC24A2Q9UI40 661 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 FBXO5Q9UKT4 447 aa13.55□□□□□ -0.24
RPAIN-209ENST00000571558 AHCTF1Q8WYP5 2266 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 PLD2O14939 933 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 FAM155BO75949 473 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 S1PR4O95977 384 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 AHSGP02765 367 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 F7P08709 466 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-209ENST00000571558 UGT1A6P19224 532 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 OGNP20774 298 aaKnown RBP13.54□□□□□ -0.24
RPAIN-209ENST00000571558 UGT1A1P22309 533 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 UGT1A4P22310 534 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 UGT1A3P35503 534 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 UGT1A5P35504 534 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 SPIDRQ14159 915 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 WSCD2Q2TBF2 565 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 ZNF542PQ5EBM4 170 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 ZRANB3Q5FWF4 1079 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 FOXR1Q6PIV2 292 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 ADGRD1Q6QNK2 874 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 KIAA0408Q6ZU52 694 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 CTAGE3PQ8IX95 158 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 TP53I13Q8NBR0 393 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-209ENST00000571558 ZNF398Q8TD17 642 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 EPS8L3Q8TE67 593 aaKnown RBP13.54□□□□□ -0.24
RPAIN-209ENST00000571558 CDKL2Q92772 493 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 KLK6Q92876 244 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 AP2M1Q96CW1 435 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 LENG8Q96PV6 779 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-209ENST00000571558 TCF12Q99081 682 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 KLF6Q99612 283 aaPredicted RBP13.54□□□□□ -0.24
RPAIN-209ENST00000571558 CCDC77Q9BR77 488 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 ZSCAN5AQ9BUG6 496 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 PPCSQ9HAB8 311 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 FZD3Q9NPG1 666 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 SMOXQ9NWM0 555 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 KCTD5Q9NXV2 234 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 ANKMY1Q9P2S6 941 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 SPASTQ9UBP0 616 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 ZNF180Q9UJW8 692 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 SLC30A1Q9Y6M5 507 aa13.54□□□□□ -0.24
RPAIN-209ENST00000571558 FADS2P1A8MWK0 482 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 POC1B-GALNT4F8VUJ3 575 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 ATP8B1O43520 1251 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 IVLP07476 585 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 JUNDP17535 347 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 ITGALP20701 1170 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 LEPRP48357 1165 aaKnown RBP13.53□□□□□ -0.24
RPAIN-209ENST00000571558 IFFO1Q0D2I5 559 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 ITGA9Q13797 1035 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 FASTKD1Q53R41 847 aaKnown RBP13.53□□□□□ -0.24
RPAIN-209ENST00000571558 ZNF789Q5FWF6 425 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 PACS1Q6VY07 963 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 STRA8Q7Z7C7 330 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 LDB1Q86U70 411 aaPredicted RBP13.53□□□□□ -0.24
RPAIN-209ENST00000571558 NXPE1Q8N323 547 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 ZSCAN1Q8NBB4 408 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 PLA2G15Q8NCC3 412 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 CENPTQ96BT3 561 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 VPS35Q96QK1 796 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 CPNE1Q99829 537 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 SPATA16Q9BXB7 569 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 STRADBQ9C0K7 418 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 ASB8Q9H765 288 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 MBNL1Q9NR56 388 aaKnown RBP13.53□□□□□ -0.24
RPAIN-209ENST00000571558 NSMCE4AQ9NXX6 385 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 LGALS13Q9UHV8 139 aa13.53□□□□□ -0.24
RPAIN-209ENST00000571558 CNOT6Q9ULM6 557 aaKnown RBP13.53□□□□□ -0.24
RPAIN-209ENST00000571558 IGLV3-16A0A075B6K0 115 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 HMX2A2RU54 273 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 POM121BA6NF01 834 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 LMO7DNF2Z398 122 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 NTN3O00634 580 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-209ENST00000571558 FPGTO14772 594 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 RASGRF2O14827 1237 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 RAD51BO15315 384 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 NVLO15381 856 aaKnown RBP13.52□□□□□ -0.25
RPAIN-209ENST00000571558 NOBOXO60393 691 aa13.52□□□□□ -0.25
RPAIN-209ENST00000571558 PAK4O96013 591 aaPredicted RBP13.52□□□□□ -0.25
RPAIN-209ENST00000571558 LIPCP11150 499 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms