RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 NEU3Q9UQ49 428 aa15.2■□□□□ 0.02
SMG6-207ENST00000570756 RGS10O43665 173 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 CCNKO75909 580 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 GLP2RO95838 553 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 FTH1P02794 183 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 AKAP5P24588 427 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 ARSDP51689 593 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 HABP4Q5JVS0 413 aaKnown RBP15.19■□□□□ 0.02
SMG6-207ENST00000570756 ZNF549Q6P9A3 640 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 RNF19BQ6ZMZ0 732 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 AGMOQ6ZNB7 445 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 PRR23CQ6ZRP0 262 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 GPRIN1Q7Z2K8 1008 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 SYVN1Q86TM6 617 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 FRS2Q8WU20 508 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 TSPAN18Q96SJ8 248 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 DCSTAMPQ9H295 470 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 MAGIXQ9H6Y5 334 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 EIF3LQ9Y262 564 aaKnown RBP15.19■□□□□ 0.02
SMG6-207ENST00000570756 STX16O14662 325 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 SCELO95171 688 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 FADS2O95864 444 aaKnown RBP15.19■□□□□ 0.02
SMG6-207ENST00000570756 FSHRP23945 695 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 CD6P30203 668 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 FMO3P31513 532 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 CLK1P49759 484 aaKnown RBP15.19■□□□□ 0.02
SMG6-207ENST00000570756 HUNKP57058 714 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 ZNF45Q02386 682 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 RBBP7Q16576 425 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 NKG7Q16617 165 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.19■□□□□ 0.024e-8■■■■□ 21.6
SMG6-207ENST00000570756 DESI1Q6ICB0 168 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 ABI1Q8IZP0 508 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 OR2T11Q8NH01 316 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 ATL1Q8WXF7 558 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 ACOT13Q9NPJ3 140 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 HEBP1Q9NRV9 189 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 DKK3Q9UBP4 350 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 GINS2Q9Y248 185 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 A3GALT2U3KPV4 340 aa15.19■□□□□ 0.02
SMG6-207ENST00000570756 TNFRSF10AO00220 468 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 CCL22O00626 93 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 CD36P16671 472 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 IGFBP5P24593 272 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 UGT2B10P36537 528 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 RABGGTBP53611 331 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 FCGRTP55899 365 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 DEFA1P59665 94 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 DEFA3P59666 94 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 COLEC12Q5KU26 742 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 VARS2Q5ST30 1063 aaKnown RBP15.18■□□□□ 0.02
SMG6-207ENST00000570756 ANKRD34AQ69YU3 496 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 PNCKQ6P2M8 343 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 TXNDC11Q6PKC3 985 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 SCIMPQ6UWF3 145 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 USP43Q70EL4 1123 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 ZNF540Q8NDQ6 660 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 ZNF548Q8NEK5 533 aaPredicted RBP15.18■□□□□ 0.02
SMG6-207ENST00000570756 OR56A4Q8NGH8 313 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 IMP4Q96G21 291 aaKnown RBP15.18■□□□□ 0.02
SMG6-207ENST00000570756 SMOQ99835 787 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 APOL4Q9BPW4 351 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 C1QTNF3Q9BXJ4 246 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 DERL2Q9GZP9 239 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMG6-207ENST00000570756 NPAP1Q9NZP6 1156 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 TMEFF2Q9UIK5 374 aaPredicted RBP15.18■□□□□ 0.02
SMG6-207ENST00000570756 ZNF221Q9UK13 617 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 ERVW-1Q9UQF0 538 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 OR51F1A6NGY5 319 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 CD3EAPO15446 510 aaKnown RBP15.18■□□□□ 0.02
SMG6-207ENST00000570756 APOA1P02647 267 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 MT-ND2P03891 347 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 PRKACGP22612 351 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 HOXC13P31276 330 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 MASP1P48740 699 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 TIAL1Q01085 375 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMG6-207ENST00000570756 KEAP1Q14145 624 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 PLA2G4EQ3MJ16 856 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 KLRG1Q96E93 195 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 SH3GL1Q99961 368 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 THUMPD3Q9BV44 507 aaKnown RBP15.18■□□□□ 0.02
SMG6-207ENST00000570756 EMILIN2Q9BXX0 1053 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 MARCH7Q9H992 704 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 GOLGA2P5Q9HBQ8 144 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 KLK14Q9P0G3 267 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 NUDT5Q9UKK9 219 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 PNMA8BQ9ULN7 279 aaPredicted RBP15.18■□□□□ 0.02
SMG6-207ENST00000570756 AP3M1Q9Y2T2 418 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 WDR90Q96KV7 1748 aa15.18■□□□□ 0.02
SMG6-207ENST00000570756 ELOVL7A1L3X0 281 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 GUCY1B2O75343 617 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 ECI2O75521 394 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 GOT2P00505 430 aaKnown RBP15.17■□□□□ 0.02
SMG6-207ENST00000570756 KCNE1P15382 129 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 CCR1P32246 355 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 S100A5P33763 92 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 KRT6CP48668 564 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 WSCD1Q658N2 575 aa15.17■□□□□ 0.02
SMG6-207ENST00000570756 CAPN13Q6MZZ7 669 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms