RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 CELA2BP08218 269 aaPredicted RBP12.1□□□□□ -0.47
NUP93-220ENST00000569842 PYGBP11216 843 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 ZNF37AP17032 561 aaPredicted RBP12.1□□□□□ -0.47
NUP93-220ENST00000569842 PDHA2P29803 388 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 CSRP3P50461 194 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 HNRNPKP61978 463 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP93-220ENST00000569842 ILF3Q12906 894 aaKnown RBP eCLIP12.1□□□□□ -0.47
NUP93-220ENST00000569842 TTLL9Q3SXZ7 439 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 ACSBG2Q5FVE4 666 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 PLEKHS1Q5SXH7 462 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 TRABD2AQ86V40 505 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 VRK3Q8IV63 474 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 SRRM1Q8IYB3 904 aaKnown RBP12.1□□□□□ -0.47
NUP93-220ENST00000569842 EEF1AKMT1Q8WVE0 214 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 ANKRD49Q8WVL7 239 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 LRRC61Q9BV99 259 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 PCMTD2Q9NV79 361 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 CDYLQ9Y232 598 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 ACOT9Q9Y305 439 aa12.1□□□□□ -0.47
NUP93-220ENST00000569842 KLHL33A6NCF5 533 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 H3BM21 787 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 OPA1O60313 960 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 KCNJ13O60928 360 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 GPC4O75487 556 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 WISP3O95389 354 aaPredicted RBP12.09□□□□□ -0.47
NUP93-220ENST00000569842 MPOP05164 745 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 IRX4P78413 519 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 IRF9Q00978 393 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 DMPKQ09013 629 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 TAF1BQ53T94 588 aaPredicted RBP12.09□□□□□ -0.47
NUP93-220ENST00000569842 METRNLQ641Q3 311 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 SLC30A9Q6PML9 568 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 NRROSQ86YC3 692 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 SPATA6LQ8N4H0 392 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 GOLGA6L1Q8N7Z2 621 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 ARL8AQ96BM9 186 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 ELF4Q99607 663 aaPredicted RBP12.09□□□□□ -0.47
NUP93-220ENST00000569842 SYTL2Q9HCH5 934 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 PI4KAP42356 2102 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 FRYLO94915 3013 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 SNX2O60749 519 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 SDC3O75056 442 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 RETP07949 1114 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 CCDC166P0CW27 439 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 KRT4P19013 534 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 DGKAP23743 735 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 RPL10P27635 214 aaKnown RBP12.09□□□□□ -0.47
NUP93-220ENST00000569842 ACTR1BP42025 376 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 IL2P60568 153 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 ACTR1AP61163 376 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 SEPT7Q16181 437 aaKnown RBP12.09□□□□□ -0.47
NUP93-220ENST00000569842 HLA-BQ31612 363 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 TNFAIP8L3Q5GJ75 292 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 TCEAL6Q6IPX3 200 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 C4orf33Q8N1A6 199 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 GPBAR1Q8TDU6 330 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 LMX1AQ8TE12 382 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 TCEAL3Q969E4 200 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 LINGO1Q96FE5 620 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 SH3GL2Q99962 352 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 NUSAP1Q9BXS6 441 aaKnown RBP12.09□□□□□ -0.47
NUP93-220ENST00000569842 GSDMCQ9BYG8 508 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 UNKQ9C0B0 810 aaKnown RBP12.09□□□□□ -0.47
NUP93-220ENST00000569842 KCNH6Q9H252 994 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 PSMD13Q9UNM6 376 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 LAMA1P25391 3075 aa12.09□□□□□ -0.47
NUP93-220ENST00000569842 A0A087X1B8 175 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 PRR19A6NJB7 356 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 ARHGAP33O14559 1287 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 SLCO2B1O94956 709 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 ATP5DP30049 168 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 GBX1Q14549 363 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 PLA2G2CQ5R387 149 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 SH2D5Q6ZV89 423 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 TAF8Q7Z7C8 310 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 TBC1D1Q86TI0 1168 aaPredicted RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 ACMSDQ8TDX5 336 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 SKA2Q8WVK7 121 aaPredicted RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 STMN4Q9H169 189 aaPredicted RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 SPASTQ9UBP0 616 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 NOVA2Q9UNW9 492 aaKnown RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 WDR87Q6ZQQ6 2873 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 KHNYNO15037 678 aaKnown RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 TSPAN12O95859 305 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 TOP3BO95985 862 aaKnown RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 IDSP22304 550 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 NBL1P41271 181 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 ARRB1P49407 418 aaPredicted RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 RGS4P49798 205 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 PLOD1Q02809 727 aaPredicted RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 CSHL1Q14406 222 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 ELOCQ15369 112 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 PIWIL4Q7Z3Z4 852 aaKnown RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 NKAPQ8N5F7 415 aaKnown RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 ZNF548Q8NEK5 533 aaPredicted RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
NUP93-220ENST00000569842 KCTD4Q8WVF5 259 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 GLMNQ92990 594 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 CABS1Q96KC9 395 aa12.08□□□□□ -0.48
NUP93-220ENST00000569842 UBXN10Q96LJ8 280 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms