RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 PWWP2BQ6NUJ5 590 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 C16orf46Q6P387 395 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 C6orf15Q6UXA7 325 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 ATG14Q6ZNE5 492 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 KIAA1328Q86T90 577 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 TMEM139Q8IV31 216 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 RBM12BQ8IXT5 1001 aaKnown RBP13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 ESX1Q8N693 406 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 CT55Q8WUE5 264 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 KIAA1143Q96AT1 154 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 SPATA13Q96N96 652 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 TTC25Q96NG3 672 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 ASB8Q9H765 288 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 ZNF71Q9NQZ8 489 aaPredicted RBP13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 IMP3Q9NV31 184 aaKnown RBP13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 SLC24A2Q9UI40 661 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 R3HDM2Q9Y2K5 976 aaKnown RBP13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 CCDC88CQ9P219 2028 aa13.52□□□□□ -0.25
GTF3C1-211ENST00000569653 TCRBV7S2A1N4TA0A589 114 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 OR5K3A6NET4 321 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 DDX3YO15523 660 aaKnown RBP13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 KCNJ13O60928 360 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 ANXA9O76027 345 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 SFTPCP11686 197 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 VCLP18206 1134 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 HALP42357 657 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 CSRP3P50461 194 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 NAP1L1P55209 391 aaKnown RBP13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 KCTD11Q693B1 232 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 CAPRIN2Q6IMN6 1127 aaKnown RBP13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 RASGRP3Q8IV61 690 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 CDKL3Q8IVW4 592 aaPredicted RBP13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 OR2L2Q8NH16 312 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 ZDHHC12Q96GR4 267 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 C12orf66Q96MD2 445 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 CATSPER2Q96P56 530 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 ZCCHC2Q9C0B9 1178 aaKnown RBP13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 TRIT1Q9H3H1 467 aaKnown RBP13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 LNPEPQ9UIQ6 1025 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 TUBD1Q9UJT1 453 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 PACSIN2Q9UNF0 486 aaPredicted RBP13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 EFR3BQ9Y2G0 817 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 KCNMB2Q9Y691 235 aa13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 DNMT3AQ9Y6K1 912 aaPredicted RBP13.51□□□□□ -0.25
GTF3C1-211ENST00000569653 METTL18O95568 372 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 POLBP06746 335 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 TCN2P20062 427 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 MSH3P20585 1137 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 KPNA2P52292 529 aaKnown RBP13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 GDF10P55107 478 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 TUBB3Q13509 450 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 ERV3-1Q14264 604 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 GPR19Q15760 415 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 LONRF2Q1L5Z9 754 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 CRTC2Q53ET0 693 aaPredicted RBP13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 PRAMEF17Q5VTA0 474 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 ITPRIPL1Q6GPH6 555 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 FAM199XQ6PEV8 388 aaPredicted RBP13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 NXPE1Q8N323 547 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 SLC38A9Q8NBW4 561 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 ABHD17AQ96GS6 310 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 DNAJC1Q96KC8 554 aaKnown RBP13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 LINC00615Q96LM1 132 aaPredicted RBP13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 TBL1YQ9BQ87 522 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 KIR3DX1Q9H7L2 352 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 ARNT2Q9HBZ2 717 aa13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 PIH1D1Q9NWS0 290 aaKnown RBP13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.5□□□□□ -0.25
GTF3C1-211ENST00000569653 IGLV3-16A0A075B6K0 115 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 TRBV5-4A0A0C4DH59 114 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 OR6C74A6NCV1 312 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 C5orf60A6NFR6 353 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 TLCD2A6NGC4 264 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 PDGFAP04085 211 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 NTRK1P04629 796 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 TPH1P17752 444 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 PRLHRP49683 370 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 RWDD2BP57060 319 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 RPS18P62269 152 aaKnown RBP13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 KIF5AQ12840 1032 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 KLF1Q13351 362 aaPredicted RBP13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 DNASE1L3Q13609 305 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 PLCL1Q15111 1095 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 CCDC181Q5TID7 509 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 LCN10Q6JVE6 187 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 DARS2Q6PI48 645 aaKnown RBP13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 PPP1R3BQ86XI6 285 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 PIANPQ8IYJ0 282 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 D2HGDHQ8N465 521 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 SIDT2Q8NBJ9 832 aaKnown RBP13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 C9orf43Q8TAL5 461 aaPredicted RBP13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 APOBEC4Q8WW27 367 aaKnown RBP13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 UBXN4Q92575 508 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 STAMBPL1Q96FJ0 436 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 LHX9Q9NQ69 397 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 FGF21Q9NSA1 209 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 HRASLS2Q9NWW9 162 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 PCDHGA6Q9Y5G7 932 aa13.49□□□□□ -0.25
GTF3C1-211ENST00000569653 USP9YO00507 2555 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms