RNA–Protein interactions for RNA: ENST00000569007.1

EDC3-215, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-215ENST00000569007 DCAF12Q5T6F0 453 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 IRGCQ6NXR0 463 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 CCDC81Q6ZN84 652 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 ZDHHC12Q96GR4 267 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 MS4A14Q96JA4 679 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 UBL7Q96S82 380 aaPredicted RBP17.13■□□□□ 0.33
EDC3-215ENST00000569007 CTRCQ99895 268 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 CCM2Q9BSQ5 444 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 KCNF1Q9H3M0 494 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 COG4Q9H9E3 785 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 VPS37BQ9H9H4 285 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 RIMKLBQ9ULI2 386 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 TCAF1Q9Y4C2 921 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 PCDHB11Q9Y5F2 797 aa17.13■□□□□ 0.33
EDC3-215ENST00000569007 SDK2Q58EX2 2172 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 TEX51A0A1B0GUA7 166 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 STMND1H3BQB6 276 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 K7ENP7 123 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 EFSO43281 561 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 ZSCAN12O43309 604 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 KIF1CO43896 1103 aaKnown RBP17.12■□□□□ 0.33
EDC3-215ENST00000569007 RASSF9O75901 435 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 SEPHS1P49903 392 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 SESN2P58004 480 aaPredicted RBP17.12■□□□□ 0.33
EDC3-215ENST00000569007 ACVR1Q04771 509 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 ITIH4Q14624 930 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 GSE1Q14687 1217 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 ZNF658BQ4V348 819 aaPredicted RBP17.12■□□□□ 0.33
EDC3-215ENST00000569007 CAPRIN2Q6IMN6 1127 aaKnown RBP17.12■□□□□ 0.33
EDC3-215ENST00000569007 INO80CQ6PI98 192 aaPredicted RBP17.12■□□□□ 0.33
EDC3-215ENST00000569007 AFTPHQ6ULP2 937 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 FAM92BQ6ZTR7 304 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 NLRP9Q7RTR0 991 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 VASH2Q86V25 355 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 RASGEF1CQ8N431 466 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 PPHLN1Q8NEY8 458 aaKnown RBP17.12■□□□□ 0.33
EDC3-215ENST00000569007 OR6P1Q8NGX9 317 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 SNRNP27Q8WVK2 155 aaKnown RBP17.12■□□□□ 0.33
EDC3-215ENST00000569007 PBKQ96KB5 322 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 APMAPQ9HDC9 416 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 FBXO8Q9NRD0 319 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 EPHA6Q9UF33 1036 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 PRSS21Q9Y6M0 314 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 ATRXP46100 2492 aa17.12■□□□□ 0.33
EDC3-215ENST00000569007 ATMQ13315 3056 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 TOX3O15405 576 aaPredicted RBP17.11■□□□□ 0.33
EDC3-215ENST00000569007 AP2A2O94973 939 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 GOT2P00505 430 aaKnown RBP17.11■□□□□ 0.33
EDC3-215ENST00000569007 NSG1P42857 185 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 PPP1CAP62136 330 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 CRADDP78560 199 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 KRT33BQ14525 404 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 TRIP13Q15645 432 aaPredicted RBP17.11■□□□□ 0.33
EDC3-215ENST00000569007 MANEAQ5SRI9 462 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 CACHD1Q5VU97 1274 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 TTC27Q6P3X3 843 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 KLHL35Q6PF15 583 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 ZNF534Q76KX8 674 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 PRSS42Q7Z5A4 293 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 SLC35F6Q8N357 371 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 OR4L1Q8NH43 312 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 ZFPM2Q8WW38 1151 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.11■□□□□ 0.33
EDC3-215ENST00000569007 TEFMQ96QE5 360 aaKnown RBP17.11■□□□□ 0.33
EDC3-215ENST00000569007 AP1M1Q9BXS5 423 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 RAB33BQ9H082 229 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 ZNF768Q9H5H4 540 aaKnown RBP17.11■□□□□ 0.33
EDC3-215ENST00000569007 KIR3DX1Q9H7L2 352 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 CHRAC1Q9NRG0 131 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 TRMT1Q9NXH9 659 aaKnown RBP17.11■□□□□ 0.33
EDC3-215ENST00000569007 SIDT1Q9NXL6 827 aaKnown RBP17.11■□□□□ 0.33
EDC3-215ENST00000569007 SLC24A2Q9UI40 661 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 TTC7AQ9ULT0 858 aaPredicted RBP17.11■□□□□ 0.33
EDC3-215ENST00000569007 KALRNO60229 2985 aa17.11■□□□□ 0.33
EDC3-215ENST00000569007 PDHA2P29803 388 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 PREPP48147 710 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 VPS41P49754 854 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 PRAMEP78395 509 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 PCID2Q5JVF3 399 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 LYPLAL1Q5VWZ2 237 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 CEACAM20Q6UY09 585 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 PACS1Q6VY07 963 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 NKD1Q969G9 470 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 MAGOHBQ96A72 148 aaKnown RBP17.1■□□□□ 0.33
EDC3-215ENST00000569007 OR52A5Q9H2C5 316 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 HEBP2Q9Y5Z4 205 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 COLEC10Q9Y6Z7 277 aa17.1■□□□□ 0.33
EDC3-215ENST00000569007 PIKFYVEQ9Y2I7 2098 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 TCRBV7S3A2A0A539 114 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 OR5K3A6NET4 321 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 POLR1CO15160 346 aaPredicted RBP17.09■□□□□ 0.33
EDC3-215ENST00000569007 KIF5CO60282 957 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 OR1I1O60431 355 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 GSTM1P09488 218 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 NDUFS1P28331 727 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 NPY2RP49146 381 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 TERF1P54274 439 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 SH3BP2P78314 561 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 CDK16Q00536 496 aa17.09■□□□□ 0.33
EDC3-215ENST00000569007 GSTM4Q03013 218 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms