RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 PBX1P40424 430 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 ARHGAP25P42331 645 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 EIF2S3LQ2VIR3 472 aaKnown RBP15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 ODF2Q5BJF6 829 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 GPRC6AQ5T6X5 926 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 LRRC38Q5VT99 294 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 CERS6Q6ZMG9 384 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 FAM83HQ6ZRV2 1179 aaPredicted RBP15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 GLT6D1Q7Z4J2 308 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 CPNE8Q86YQ8 564 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 RAB43Q86YS6 212 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 IQCKQ8N0W5 287 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 TTC30BQ8N4P2 665 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 SLC38A9Q8NBW4 561 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 OR2L2Q8NH16 312 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 PRR7Q8TB68 274 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 SGSM3Q96HU1 749 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 LINC00615Q96LM1 132 aaPredicted RBP15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 C12orf66Q96MD2 445 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 INSM2Q96T92 566 aaPredicted RBP15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 VAT1Q99536 393 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 CCM2Q9BSQ5 444 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 NUDT9Q9BW91 350 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 TNRC6AQ8NDV7 1962 aaKnown RBP15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 SHANK1Q9Y566 2161 aa15.34■□□□□ 0.05
HERPUD1-215ENST00000568676 OR6C74A6NCV1 312 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 C3orf70A6NLC5 250 aaPredicted RBP15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 C9J4A7 227 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 ALPPP05187 535 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 CYP2A7P20853 494 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 CDH3P22223 829 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 PTPN3P26045 913 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 AKT1P31749 480 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 HADHAP40939 763 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 KPNA2P52292 529 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 WNT3AP56704 352 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 SLC18A3Q16572 532 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 FNBP1LQ5T0N5 605 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 VWA5B1Q5TIE3 1220 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 FAM151BQ6UXP7 276 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 SYTL1Q8IYJ3 562 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 RBMXL3Q8N7X1 1067 aaKnown RBP15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 WWP1Q9H0M0 922 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 ACTR5Q9H9F9 607 aaPredicted RBP15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 PCMTD2Q9NV79 361 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 MAP10Q9P2G4 905 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 SERTAD3Q9UJW9 196 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 POMT2Q9UKY4 750 aa15.33■□□□□ 0.04
HERPUD1-215ENST00000568676 A1L4Q6 167 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 ZNF185O15231 689 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 UGT1A9O60656 530 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 IPO13O94829 963 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 LDLRP01130 860 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 TMEM253P0C7T8 217 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 UGT1A6P19224 532 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 AGXTP21549 392 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 UGT1A1P22309 533 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 UGT1A4P22310 534 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 HNRNPH3P31942 346 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 ITGA1P56199 1179 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 MRPL49Q13405 166 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 KRT33BQ14525 404 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 GSE1Q14687 1217 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 MESDQ14696 234 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 NCF4Q15080 339 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 PRKD1Q15139 912 aaPredicted RBP15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 SLC1A5Q15758 541 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 BCL7AQ4VC05 210 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 ZRANB3Q5FWF4 1079 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 SIRPB2Q5JXA9 342 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 KDELC1Q6UW63 502 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 RFX6Q8HWS3 928 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 ZBTB2Q8N680 514 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 ACVR1CQ8NER5 493 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 ZNF398Q8TD17 642 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 TFB1MQ8WVM0 346 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 TM9SF4Q92544 642 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 FER1L6-AS2Q96M78 137 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 SLC7A5P2Q9GIP4 190 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 UGT1A7Q9HAW7 530 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 UGT1A10Q9HAW8 530 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 UGT1A8Q9HAW9 530 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 DDX56Q9NY93 547 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 UBP1Q9NZI7 540 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 SLC5A6Q9Y289 635 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 B3GNT3Q9Y2A9 372 aa15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 CFAP20Q9Y6A4 193 aaKnown RBP15.32■□□□□ 0.04
HERPUD1-215ENST00000568676 STX7O15400 261 aaKnown RBP15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 CAPN1P07384 714 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 RNF224P0DH78 156 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 PREPP48147 710 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 UBASH3AP57075 661 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 ABRQ12979 859 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 MPP3Q13368 585 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 TFDP2Q14188 446 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 IQCB1Q15051 598 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 PRR30Q53SZ7 412 aaPredicted RBP15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 FAM198BQ6UWH4 519 aa15.31■□□□□ 0.04
HERPUD1-215ENST00000568676 IGFL3Q6UXB1 125 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms