RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 SLC25A23Q9BV35 468 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 TUBB2BQ9BVA1 445 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 TLR10Q9BXR5 811 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 GPR87Q9BY21 358 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 CHST8Q9H2A9 424 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 C10orf88Q9H8K7 445 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 LRRC4CQ9HCJ2 640 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 DDX56Q9NY93 547 aaKnown RBP15.14■□□□□ 0.01
NME3-211ENST00000568561 HACD3Q9P035 362 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 SLC24A2Q9UI40 661 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 PKP3Q9Y446 797 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 ARL5AQ9Y689 179 aa15.14■□□□□ 0.01
NME3-211ENST00000568561 STX7O15400 261 aaKnown RBP15.13■□□□□ 0.01
NME3-211ENST00000568561 VPS4BO75351 444 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 AGFG2O95081 481 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 LCA5LO95447 670 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 RECKO95980 971 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 POLBP06746 335 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 HLA-DPA1P20036 260 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 MSH3P20585 1137 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 MARCKSL1P49006 195 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 NR2C2P49116 596 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 PDE1BQ01064 536 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 OLIG2Q13516 323 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 TFDP2Q14188 446 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 TAZQ16635 292 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 LONRF2Q1L5Z9 754 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 C4orf17Q53FE4 359 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 ZDHHC20Q5W0Z9 365 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 CAPRIN2Q6IMN6 1127 aaKnown RBP15.13■□□□□ 0.01
NME3-211ENST00000568561 ARMC6Q6NXE6 501 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 MICALCLQ6ZW33 695 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 PID1Q7Z2X4 250 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 SYVN1Q86TM6 617 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 KMT5CQ86Y97 462 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 FCRL5Q96RD9 977 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 CD180Q99467 661 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 APOL2Q9BQE5 337 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 FICDQ9BVA6 458 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 ING2Q9H160 280 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 NHEJ1Q9H9Q4 299 aaPredicted RBP15.13■□□□□ 0.01
NME3-211ENST00000568561 ACSS2Q9NR19 701 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 ABHD10Q9NUJ1 306 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 ZNHIT6Q9NWK9 470 aaKnown RBP15.13■□□□□ 0.01
NME3-211ENST00000568561 RSPH14Q9UHP6 348 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 FKBPLQ9UIM3 349 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 VPS4AQ9UN37 437 aa15.13■□□□□ 0.01
NME3-211ENST00000568561 FARSAQ9Y285 508 aaKnown RBP15.13■□□□□ 0.01
NME3-211ENST00000568561 SEC16AO15027 2179 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 ZBTB11O95625 1053 aaPredicted RBP15.12■□□□□ 0.01
NME3-211ENST00000568561 AGTP01019 485 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 EPOP01588 193 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 SLC35G4P0C7Q5 338 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 RNF224P0DH78 156 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 POLR2CP19387 275 aaPredicted RBP15.12■□□□□ 0.01
NME3-211ENST00000568561 ABRQ12979 859 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 ENDOVQ8N8Q3 282 aaKnown RBP15.12■□□□□ 0.01
NME3-211ENST00000568561 ZNF398Q8TD17 642 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 DTX3LQ8TDB6 740 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 THAP4Q8WY91 577 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 P3H4Q92791 437 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 CCDC42Q96M95 316 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 QKIQ96PU8 341 aaKnown RBP eCLIP15.12■□□□□ 0.01
NME3-211ENST00000568561 GORASP1Q9BQQ3 440 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 FSD1LQ9BXM9 530 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 KIR3DX1Q9H7L2 352 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 KCND1Q9NSA2 647 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 SMOXQ9NWM0 555 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 DNMT3AQ9Y6K1 912 aaPredicted RBP15.12■□□□□ 0.01
NME3-211ENST00000568561 CCDC88CQ9P219 2028 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 PIKFYVEQ9Y2I7 2098 aa15.12■□□□□ 0.01
NME3-211ENST00000568561 hCG_1818297A0A087WSY0 165 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 MGAT4DA6NG13 374 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 SLC9B1P1A6NJY1 282 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 SGTAO43765 313 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 MFAP3LO75121 409 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 TPM3P06753 285 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 SLC1A1P43005 524 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 MPP3Q13368 585 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 GSE1Q14687 1217 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 TMTC4Q5T4D3 741 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 BZW1Q7L1Q6 419 aaKnown RBP15.11■□□□□ 0.01
NME3-211ENST00000568561 BPHLQ86WA6 291 aaPredicted RBP15.11■□□□□ 0.01
NME3-211ENST00000568561 CCDC50Q8IVM0 306 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 GALNT11Q8NCW6 608 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 OR4E2Q8NGC2 313 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 OR4K2Q8NGD2 314 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 OR2L2Q8NH16 312 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 SEC14L1Q92503 715 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 CLIP3Q96DZ5 547 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 MFRPQ9BY79 579 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 KLHL25Q9H0H3 589 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 FAM96AQ9H5X1 160 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 ASB8Q9H765 288 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.11■□□□□ 0.01
NME3-211ENST00000568561 SNX7Q9UNH6 387 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 BTRCQ9Y297 605 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 ITPR2Q14571 2701 aa15.11■□□□□ 0.01
NME3-211ENST00000568561 SNRNP200O75643 2136 aaKnown RBP15.1■□□□□ 0.01
NME3-211ENST00000568561 GSAPA4D1B5 854 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms