RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 GRTP1Q5TC63 336 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 ANKRD20A1Q5TYW2 823 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 TLDC1Q6P9B6 456 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 C1orf228Q6PIY5 440 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 C4orf50Q6ZRC1 276 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 BEND5Q7L4P6 421 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 BNIPLQ7Z465 357 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 ACOT1Q86TX2 421 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 RSPH3Q86UC2 560 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 SERINC5Q86VE9 423 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CAND1Q86VP6 1230 aaKnown RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 NUDCD3Q8IVD9 361 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CMTR2Q8IYT2 770 aaKnown RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 SIX6OS1Q8N1H7 587 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 KIF2BQ8N4N8 673 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 PPFIBP2Q8ND30 876 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 NLGN4YQ8NFZ3 816 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 GABPB2Q8TAK5 448 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CCDC110Q8TBZ0 833 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 DEPDC1BQ8WUY9 529 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 NSMCE1Q8WV22 266 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 IRGQQ8WZA9 623 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 N4BP2L2Q92802 583 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 STMN2Q93045 179 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 NT5C3BQ969T7 300 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 C18orf25Q96B23 403 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 TBC1D31Q96DN5 1066 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 PGAP3Q96FM1 320 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CFAP36Q96G28 342 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 OXNAD1Q96HP4 312 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CPB2Q96IY4 423 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CPNE1Q99829 537 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 MRPL45Q9BRJ2 306 aaKnown RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 DUSP16Q9BY84 665 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 C11orf54Q9H0W9 315 aaPredicted RBP5.3□□□□□ -1.56
CAPN3-217ENST00000567817 SERHL2Q9H4I8 314 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CXorf56Q9H5V9 222 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 LRRC40Q9H9A6 602 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 LRRC4Q9HBW1 653 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 CNGB3Q9NQW8 809 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 DONSONQ9NYP3 566 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 LRRC42Q9Y546 428 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 DMRT1Q9Y5R6 373 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 MAD1L1Q9Y6D9 718 aa5.3□□□□□ -1.56
CAPN3-217ENST00000567817 LCTP09848 1927 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 KIAA1217Q5T5P2 1943 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 A0A1B0GTW7 788 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SMIM28A0A1B0GU29 152 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 VGLL3A8MV65 326 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SPECC1L-ADORA2AF8WAN1 911 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SLCO1B7G3V0H7 640 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 M0QZ92 97 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 CAPN9O14815 690 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SLC22A2O15244 555 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SNNO75324 88 aaPredicted RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 RFPL1O75677 317 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 CIB2O75838 187 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 USP1O94782 785 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SERPINE1P05121 402 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 ELANEP08246 267 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 LINC00271P0C7V0 271 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 FAM200BP0CF97 657 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 T-ENOLP0DO92 83 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 MYL2P10916 166 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 ACADSP16219 412 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 BGNP21810 368 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 IBSPP21815 317 aaPredicted RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 RPL9P32969 192 aaKnown RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 NRIP1P48552 1158 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 RGS7P49802 495 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SULT1E1P49888 294 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SERPINB8P50452 374 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 ATXN1P54253 815 aaKnown RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SH3BGRP55822 239 aaPredicted RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 IRX4P78413 519 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 GBE1Q04446 702 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 OCA2Q04671 838 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 ASPHQ12797 758 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 STX3Q13277 289 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 MTA1Q13330 715 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 BTG3Q14201 252 aaPredicted RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 PRPSAP1Q14558 356 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 RAB39AQ14964 217 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 EFTUD2Q15029 972 aaKnown RBP eCLIP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 CCDC6Q16204 474 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 UGP2Q16851 508 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 KCTD19Q17RG1 926 aaPredicted RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SOWAHAQ2M3V2 549 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 TRMT5Q32P41 509 aaKnown RBP5.29□□□□□ -1.56
CAPN3-217ENST00000567817 ZNF528Q3MIS6 628 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 SPDYE7PQ495Y7 208 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 MARCH8Q5T0T0 291 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 METTL21CQ5VZV1 264 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 NCBP2-AS2Q69YL0 99 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 CES5AQ6NT32 575 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 TRNP1Q6NT89 227 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 Q6YL49 198 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 LINC00523Q86TU6 105 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 PIGZQ86VD9 579 aa5.29□□□□□ -1.56
CAPN3-217ENST00000567817 LONP2Q86WA8 852 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms