RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 TRIM31Q9BZY9 425 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 OR52A5Q9H2C5 316 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 EPB41L1Q9H4G0 881 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 POLR1BQ9H9Y6 1135 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 SATB2Q9UPW6 733 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 PIKFYVEQ9Y2I7 2098 aa21.16■□□□□ 0.98
NME3-210ENST00000567271 MAP1BP46821 2468 aaKnown RBP21.15■□□□□ 0.98
NME3-210ENST00000567271 IGHV5-10-1A0A0J9YXX1 117 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 FAM187AA6NFU0 413 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 EFCAB8A8MWE9 144 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 PRMT5O14744 637 aaPredicted RBP21.15■□□□□ 0.98
NME3-210ENST00000567271 NDUFS3O75489 264 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 LIMK2P53671 638 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 ITGA8P53708 1063 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 GABREP78334 506 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 MRPS25P82663 173 aaKnown RBP21.15■□□□□ 0.98
NME3-210ENST00000567271 DHX9Q08211 1270 aaKnown RBP21.15■□□□□ 0.98
NME3-210ENST00000567271 MSS51Q4VC12 460 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 DNAJC21Q5F1R6 531 aaKnown RBP21.15■□□□□ 0.98
NME3-210ENST00000567271 C3orf38Q5JPI3 329 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 NEPROQ6NW34 567 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 WDR74Q6RFH5 385 aaPredicted RBP21.15■□□□□ 0.98
NME3-210ENST00000567271 MAATS1Q7Z4T9 603 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 OTUD6BQ8N6M0 293 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 ZCCHC14Q8WYQ9 949 aaKnown RBP21.15■□□□□ 0.98
NME3-210ENST00000567271 NCSTNQ92542 709 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 ELMO1Q92556 727 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 STAMBPL1Q96FJ0 436 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 TCF12Q99081 682 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 P2RY12Q9H244 342 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 TMEM9Q9P0T7 183 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 CDC23Q9UJX2 597 aa21.15■□□□□ 0.98
NME3-210ENST00000567271 CFAP20Q9Y6A4 193 aaKnown RBP21.15■□□□□ 0.98
NME3-210ENST00000567271 LIN7AO14910 233 aaPredicted RBP21.14■□□□□ 0.97
NME3-210ENST00000567271 TP73O15350 636 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 BRINP1O60477 761 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 TUBB4AP04350 444 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 PDHA2P29803 388 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 MAPK9P45984 424 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 PREPP48147 710 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 CD151P48509 253 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 PPM1FP49593 454 aaPredicted RBP21.14■□□□□ 0.97
NME3-210ENST00000567271 EIF3IQ13347 325 aaKnown RBP21.14■□□□□ 0.97
NME3-210ENST00000567271 TYSND1Q2T9J0 566 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 PHF19Q5T6S3 580 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 ZNF449Q6P9G9 518 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 RAB11FIP2Q7L804 512 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 ZFPM2Q8WW38 1151 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 PRR11Q96HE9 360 aaPredicted RBP21.14■□□□□ 0.97
NME3-210ENST00000567271 EBNA1BP2Q99848 306 aaKnown RBP21.14■□□□□ 0.97
NME3-210ENST00000567271 CARD6Q9BX69 1037 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 IL1RAPL1Q9NZN1 696 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 OGFRQ9NZT2 677 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 PDP2Q9P2J9 529 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 SNX24Q9Y343 169 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 PCDHGA8Q9Y5G5 932 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 FAM169AQ9Y6X4 670 aa21.14■□□□□ 0.97
NME3-210ENST00000567271 SLC5A10A0PJK1 596 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 PMS2P1A4D2B8 440 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 RAD51CO43502 376 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 BANF1O75531 89 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 URI1O94763 535 aaPredicted RBP21.13■□□□□ 0.97
NME3-210ENST00000567271 UBXN7O94888 489 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 PGAM1P18669 254 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 OGNP20774 298 aaKnown RBP21.13■□□□□ 0.97
NME3-210ENST00000567271 RPS3P23396 243 aaKnown RBP eCLIP21.13■□□□□ 0.97
NME3-210ENST00000567271 MPSTP25325 297 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 RPL21P46778 160 aaKnown RBP21.13■□□□□ 0.97
NME3-210ENST00000567271 TRA2AQ13595 282 aaKnown RBP eCLIP21.13■□□□□ 0.97
NME3-210ENST00000567271 LONRF1Q17RB8 773 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 DUS1LQ6P1R4 473 aaKnown RBP21.13■□□□□ 0.97
NME3-210ENST00000567271 IGF2-ASQ6U949 168 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 LRRC6Q86X45 466 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 LSMEM2Q8N112 164 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 PDIK1LQ8N165 341 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 TMEM159Q96B96 161 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 CCDC74BQ96LY2 380 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 PWWP2AQ96N64 755 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 ERP44Q9BS26 406 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 TSSK1BQ9BXA7 367 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 HEBP2Q9Y5Z4 205 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 COLEC10Q9Y6Z7 277 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 KIF26BQ2KJY2 2108 aa21.13■□□□□ 0.97
NME3-210ENST00000567271 IQCF5A8MTL0 148 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 TAF4O00268 1085 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 IFRD1O00458 451 aaPredicted RBP21.12■□□□□ 0.97
NME3-210ENST00000567271 PFDN6O15212 129 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 DXOO77932 396 aaKnown RBP21.12■□□□□ 0.97
NME3-210ENST00000567271 THRAP10827 490 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 TYRP1P17643 537 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 ITGB6P18564 788 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 CCR7P32248 378 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 CKAP4Q07065 602 aaKnown RBP21.12■□□□□ 0.97
NME3-210ENST00000567271 THOC5Q13769 683 aaKnown RBP21.12■□□□□ 0.97
NME3-210ENST00000567271 BBS9Q3SYG4 887 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 RNF187Q5TA31 235 aaPredicted RBP21.12■□□□□ 0.97
NME3-210ENST00000567271 NAPRTQ6XQN6 538 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 CENPUQ71F23 418 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 PROSER1Q86XN7 944 aa21.12■□□□□ 0.97
NME3-210ENST00000567271 CILP2Q8IUL8 1156 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms