RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 LHX3Q9UBR4 397 aa9.47□□□□□ -0.89
CAPN3-216ENST00000567071 GPN3Q9UHW5 284 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-216ENST00000567071 INTUQ9ULD6 942 aa9.47□□□□□ -0.89
CAPN3-216ENST00000567071 GUCA1BQ9UMX6 200 aa9.47□□□□□ -0.89
CAPN3-216ENST00000567071 SPTBP11277 2137 aa9.47□□□□□ -0.89
CAPN3-216ENST00000567071 VPS13CQ709C8 3753 aa9.46□□□□□ -0.89
CAPN3-216ENST00000567071 CYP1A2P05177 515 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 PYGLP06737 847 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 MYBL1P10243 752 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 PYGMP11217 842 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 ACP5P13686 325 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 SCNN1AP37088 669 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 ETV3P41162 512 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 NAP1L1P55209 391 aaKnown RBP9.46□□□□□ -0.9
CAPN3-216ENST00000567071 HSD11B2P80365 405 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 PLCL1Q15111 1095 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 C3AR1Q16581 482 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 LCN10Q6JVE6 187 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 DNAJC24Q6P3W2 148 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 ADAMTSL4Q6UY14 1074 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 SLC26A9Q7LBE3 791 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 SPNS2Q8IVW8 549 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 PHC2Q8IXK0 858 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 RBM12BQ8IXT5 1001 aaKnown RBP9.46□□□□□ -0.9
CAPN3-216ENST00000567071 DNAAF3Q8N9W5 541 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 SLC38A9Q8NBW4 561 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 NETO2Q8NC67 525 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 FNIP1Q8TF40 1166 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 C18orf8Q96DM3 657 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 PGAP3Q96FM1 320 aaPredicted RBP9.46□□□□□ -0.9
CAPN3-216ENST00000567071 PLEKHG4BQ96PX9 1271 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 NPY6RQ99463 290 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 NUP85Q9BW27 656 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 TSGA10Q9BZW7 698 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 RAB33BQ9H082 229 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 OSGEPL1Q9H4B0 414 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 ACTR5Q9H9F9 607 aaPredicted RBP9.46□□□□□ -0.9
CAPN3-216ENST00000567071 METTL5Q9NRN9 209 aaKnown RBP9.46□□□□□ -0.9
CAPN3-216ENST00000567071 TMEM248Q9NWD8 314 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.46□□□□□ -0.9
CAPN3-216ENST00000567071 CTTNBP2NLQ9P2B4 639 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 B4GALT6Q9UBX8 382 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 TINAGQ9UJW2 476 aa9.46□□□□□ -0.9
CAPN3-216ENST00000567071 PTRH2Q9Y3E5 179 aaKnown RBP9.46□□□□□ -0.9
CAPN3-216ENST00000567071 TRAV17A0A0B4J275 112 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 UBA6A0AVT1 1052 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-216ENST00000567071 DYTNA2CJ06 578 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 CCDC78A2IDD5 438 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 GOLGA6L9A6NEM1 432 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 TLCD2A6NGC4 264 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 ESPNB1AK53 854 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 I6L893 689 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-216ENST00000567071 LY6G6DO95868 133 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 CAPN1P07384 714 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 NUDT7P0C024 238 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 XRCC1P18887 633 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-216ENST00000567071 CYP2A7P20853 494 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 VIPR1P32241 457 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 GABRB2P47870 512 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 ADCY2Q08462 1091 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 GPR19Q15760 415 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 CNGA3Q16281 694 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 FAM102AQ5T9C2 384 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-216ENST00000567071 PRAMEF13Q5VWM6 474 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 TRIM74Q86UV6 250 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 C3orf20Q8ND61 904 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 WFDC11Q8NEX6 87 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 SLC35G2Q8TBE7 412 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 ADAMTS18Q8TE60 1221 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 TMEM158Q8WZ71 300 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 SDCCAG3Q96C92 435 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 BTBD6Q96KE9 485 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 C16orf45Q96MC5 204 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-216ENST00000567071 MCEEQ96PE7 176 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 CD180Q99467 661 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 SELENOOQ9BVL4 669 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 POLDIP3Q9BY77 421 aaKnown RBP9.45□□□□□ -0.9
CAPN3-216ENST00000567071 TRIM7Q9C029 511 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 GOLPH3Q9H4A6 298 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 POT1Q9NUX5 634 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 SOHLH2Q9NX45 425 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 VPS18Q9P253 973 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 SEMA5BQ9P283 1151 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 ABI3Q9P2A4 366 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 UBA2Q9UBT2 640 aaPredicted RBP9.45□□□□□ -0.9
CAPN3-216ENST00000567071 PLEKHA6Q9Y2H5 1048 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 MEMO1Q9Y316 297 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 PRKAB1Q9Y478 270 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 CAPN6Q9Y6Q1 641 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 NUP210LQ5VU65 1888 aa9.45□□□□□ -0.9
CAPN3-216ENST00000567071 CCDC88CQ9P219 2028 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 A0A0A6YYK5 440 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-216ENST00000567071 TCRBV5S1A1TA0A578 114 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 AGPSO00116 658 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 PSMD11O00231 422 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 HEXIM1O94992 359 aaKnown RBP9.44□□□□□ -0.9
CAPN3-216ENST00000567071 MLYCDO95822 493 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 HBQ1P09105 142 aa9.44□□□□□ -0.9
CAPN3-216ENST00000567071 CYP2A6P11509 494 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-216ENST00000567071 UGT1A4P22310 534 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms