RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 PDS5BQ9NTI5 1447 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SALL3Q9BXA9 1300 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 A0A096LPK6 155 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TRBV2A0A0J9YWF9 115 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SDR42E2A6NKP2 422 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 AHRRA9YTQ3 701 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 KBTBD13C9JR72 458 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TLR4O00206 839 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SMAD9O15198 467 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC16A5O15375 505 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 YY2O15391 372 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TEX28O15482 410 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 KLK8O60259 260 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 CYTIPO60759 359 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 ATP6V1G1O75348 118 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 GCATO75600 419 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TMCC1O94876 653 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 OR6B1O95007 311 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 CBSLP0DN79 551 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 EPB41P11171 864 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 NR2F2P24468 414 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 DDX6P26196 483 aaKnown RBP eCLIP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 CBSP35520 551 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 MAGEB1P43366 347 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 DHPSP49366 369 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 MXI1P50539 228 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SCNN1GP51170 649 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 GBE1Q04446 702 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SPOCK1Q08629 439 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 PPP1R8Q12972 351 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TMED1Q13445 227 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TSTA3Q13630 321 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 DPYSQ14117 519 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 CDSNQ15517 529 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 C2orf68Q2NKX9 166 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SOWAHCQ53LP3 525 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SGO1Q5FBB7 561 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF789Q5FWF6 425 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 PCID2Q5JVF3 399 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 STXBP5Q5T5C0 1151 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TXNRD3NBQ6F5E7 133 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SULT1C3Q6IMI6 304 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 NEK5Q6P3R8 708 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC27A1Q6PCB7 646 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 PSRC1Q6PGN9 363 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 PAPD4Q6PIY7 484 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 FIGLAQ6QHK4 219 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC36A4Q6YBV0 504 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TFAP2DQ7Z6R9 452 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TAF8Q7Z7C8 310 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 AMZ2Q86W34 360 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 RFX6Q8HWS3 928 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 PALM2Q8IXS6 379 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 C16orf71Q8IYS4 520 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 BEST2Q8NFU1 509 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 OR1J2Q8NGS2 313 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 RP9Q8TA86 221 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 HM13Q8TCT9 377 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 NEU4Q8WWR8 484 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC5A11Q8WWX8 675 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 FAM46BQ96A09 425 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 ORAI1Q96D31 301 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 MRPL38Q96DV4 380 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 BOD1Q96IK1 185 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC41A2Q96JW4 573 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 PBKQ96KB5 322 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SPATA33Q96N06 139 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 CPNE1Q99829 537 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 MACROD1Q9BQ69 325 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 FAM110AQ9BQ89 295 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 ZNF559Q9BR84 538 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TPPP3Q9BW30 176 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SSBP3Q9BWW4 388 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 CCSER1Q9C0I3 900 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 S1PR5Q9H228 398 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 CARD9Q9H257 536 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 AKIP1Q9NQ31 210 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 DUSP22Q9NRW4 184 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 KLC4Q9NSK0 619 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TCP11L1Q9NUJ3 509 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 DPP3Q9NY33 737 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 TFCP2L1Q9NZI6 479 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 STK26Q9P289 416 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 ARPP21Q9UBL0 812 aaPredicted RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 SLC9A2Q9UBY0 812 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 CLIP2Q9UDT6 1046 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 NDRG3Q9UGV2 375 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 FAM153AQ9UHL3 310 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 ATP6V1HQ9UI12 483 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 B3GALT5Q9Y2C3 310 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 HBS1LQ9Y450 684 aaKnown RBP3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 ASB3Q9Y575 518 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 MRC2Q9UBG0 1479 aa3.27□□□□□ -1.89
HERPUD1-211ENST00000566550 ARHGEF40Q8TER5 1519 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 ARPC4-TTLL3A0A0A6YYG9 625 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 A0A0B4J203 849 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 A0A0G2JPF8 293 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 A0A0U1RQF3 1178 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 A0A1W2PPW3 197 aa3.26□□□□□ -1.89
HERPUD1-211ENST00000566550 KANSL1LA0AUZ9 987 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms