RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SCNN1GP51170 649 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 MFSD14CQ5VZR4 134 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 TTC23Q5W5X9 447 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 CES5AQ6NT32 575 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 PKN3Q6P5Z2 889 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 TTC16Q8NEE8 873 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 ANKK1Q8NFD2 765 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.06■□□□□ 0.16
LINC00554-201ENST00000564841 PTERQ96BW5 349 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 UBXN10Q96LJ8 280 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 KIFC1Q9BW19 673 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 KATNAL1Q9BW62 490 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 TNKS2Q9H2K2 1166 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 MRGBPQ9NV56 204 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 YJEFN3A6XGL0 299 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 HAS3O00219 553 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 DCLK1O15075 740 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 CST1P01037 141 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 PFKLP17858 780 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 IFNA8P32881 189 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 GGT5P36269 586 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 TAF6P49848 677 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 P2RX3P56373 397 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 LILRA4P59901 499 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 CACNB2Q08289 660 aaPredicted RBP16.06■□□□□ 0.16
LINC00554-201ENST00000564841 PTRH1Q86Y79 214 aaKnown RBP16.06■□□□□ 0.16
LINC00554-201ENST00000564841 FAM20CQ8IXL6 584 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 NECTIN4Q96NY8 510 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 NEDD4LQ96PU5 975 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 HBEGFQ99075 208 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 PRRG3Q9BZD7 231 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 DCSTAMPQ9H295 470 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 WDR6Q9NNW5 1121 aaKnown RBP16.06■□□□□ 0.16
LINC00554-201ENST00000564841 SDR39U1Q9NRG7 319 aaPredicted RBP16.06■□□□□ 0.16
LINC00554-201ENST00000564841 TRMT13Q9NUP7 481 aaKnown RBP16.06■□□□□ 0.16
LINC00554-201ENST00000564841 MIOSQ9NXC5 875 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 GTF2IRD1Q9UHL9 959 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 ITM2BQ9Y287 266 aa16.06■□□□□ 0.16
LINC00554-201ENST00000564841 CENPBD1B2RD01 187 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 ANGPTL1O95841 491 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 PRKAR2AP13861 404 aaKnown RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 IL12AP29459 219 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 PRDX3P30048 256 aaKnown RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 FCGRTP55899 365 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 CHRNEQ04844 493 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 ZBTB6Q15916 424 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 KCNA10Q16322 511 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 GALNT12Q8IXK2 581 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 CLYBLQ8N0X4 340 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 LEMD2Q8NC56 503 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 BARD1Q99728 777 aaKnown RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 BBS2Q9BXC9 721 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 TMEM30AQ9NV96 361 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 FBXL12Q9NXK8 326 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 A0A1W2PP18 115 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 FAM92AA1XBS5 289 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 PTGESO14684 152 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 DUSP11O75319 330 aaKnown RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 PMPCBO75439 489 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 CD36P16671 472 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 IMPDH1P20839 514 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 MATKP42679 507 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 ZFP36L2P47974 494 aaKnown RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 TKTL1P51854 596 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 GPLD1P80108 840 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 PFKFB4Q16877 469 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 RAP1GAP2Q684P5 730 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 MICU2Q8IYU8 434 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 ELMOD2Q8IZ81 293 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 PARP16Q8N5Y8 322 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 PTGR2Q8N8N7 351 aaPredicted RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 ACOX2Q99424 681 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 FICDQ9BVA6 458 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 OR2B2Q9GZK3 357 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 NECTIN3Q9NQS3 549 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 ZSWIM8A7E2V4 1837 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 LTA4HP09960 611 aaKnown RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 MYCLP1P12525 358 aaPredicted RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 PRKACBP22694 351 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 KCNK10P57789 538 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 OR2B6P58173 313 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 MRPS6P82932 125 aaKnown RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 AGAP6Q5VW22 663 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 B3GNT8Q7Z7M8 397 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 ESAMQ96AP7 390 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 AURKBQ96GD4 344 aaPredicted RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 AGAP4Q96P64 663 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 ULBP1Q9BZM6 244 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 SEMA4BQ9NPR2 832 aaPredicted RBP16.05■□□□□ 0.16
LINC00554-201ENST00000564841 C8orf4Q9NR00 106 aa16.05■□□□□ 0.16
LINC00554-201ENST00000564841 SLC12A8A0AV02 714 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 PABPN1LA6NDY0 278 aaKnown RBP16.04■□□□□ 0.16
LINC00554-201ENST00000564841 EFCAB9A8MZ26 197 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 UBXN8O00124 270 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 POLR2EP19388 210 aaKnown RBP16.04■□□□□ 0.16
LINC00554-201ENST00000564841 EPHA2P29317 976 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 CDKN2DP55273 166 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 SREBF2Q12772 1141 aa16.04■□□□□ 0.16
LINC00554-201ENST00000564841 AGAP9Q5VTM2 703 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms