RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 CCM2Q9BSQ5 444 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 WWP1Q9H0M0 922 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 IMP3Q9NV31 184 aaKnown RBP16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 SLC24A2Q9UI40 661 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 KCND3Q9UK17 655 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 CROTQ9UKG9 612 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 PADI1Q9ULC6 663 aa16.81■□□□□ 0.28
VPS9D1-203ENST00000563798 IGLV3-16A0A075B6K0 115 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 TRBV5-4A0A0C4DH59 114 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 GRID2IPA4D2P6 1211 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 H7C0S8 307 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 LDB2O43679 373 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 PRKAR1AP10644 381 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 RALBP11234 206 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 FOLR1P15328 257 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 NDUFS1P28331 727 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 PARP6Q2NL67 630 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 ZNF658BQ4V348 819 aaPredicted RBP16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 AADACL2Q6P093 401 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 DET1Q7L5Y6 550 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 OOSP2Q86WS3 158 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 D2HGDHQ8N465 521 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 SIDT2Q8NBJ9 832 aaKnown RBP16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 TTC13Q8NBP0 860 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 HM13Q8TCT9 377 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 LRRC45Q96CN5 670 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 DCUN1D1Q96GG9 259 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 C12orf66Q96MD2 445 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 MAP3K3Q99759 626 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 LHX9Q9NQ69 397 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 HRASLS2Q9NWW9 162 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 RARRES3Q9UL19 164 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 PCDHB3Q9Y5E6 796 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 COLEC10Q9Y6Z7 277 aa16.8■□□□□ 0.28
VPS9D1-203ENST00000563798 MACROD2A1Z1Q3 448 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 C21orf140B9A014 251 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 PYCARD-AS1I3L0S3 204 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 TIAF1O95411 115 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 SLC35G4P0C7Q5 338 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 CCNYL3P0C7X3 344 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 ITGALP20701 1170 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 PSMA3P25788 255 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 PBLDP30039 288 aaPredicted RBP16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 NAP1L1P55209 391 aaKnown RBP16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 HSD11B2P80365 405 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 KLF1Q13351 362 aaPredicted RBP16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 TUBB3Q13509 450 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 PLCL1Q15111 1095 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 DEFB109BQ30KR1 87 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 DNTTIP2Q5QJE6 756 aaKnown RBP16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 SPDYE1Q8NFV5 336 aaPredicted RBP16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 OR8K5Q8NH50 307 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 C9orf43Q8TAL5 461 aaPredicted RBP16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 ELMO2Q96JJ3 720 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 RMDN2Q96LZ7 410 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 COPS8Q99627 209 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 FAM118BQ9BPY3 351 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 LNPEPQ9UIQ6 1025 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 CRLS1Q9UJA2 301 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 ANAPC2Q9UJX6 822 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 HEBP2Q9Y5Z4 205 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 MRPS18BQ9Y676 258 aaKnown RBP16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 KCNMB2Q9Y691 235 aa16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 CFAP20Q9Y6A4 193 aaKnown RBP16.79■□□□□ 0.28
VPS9D1-203ENST00000563798 MIF4GDA9UHW6 222 aaKnown RBP16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 CFAP99D6REC4 459 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 ZBTB11O95625 1053 aaPredicted RBP16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 ATP1B2P14415 290 aaPredicted RBP16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 PWWP2BQ6NUJ5 590 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 C16orf46Q6P387 395 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 CFAP206Q8IYR0 622 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 ACRBPQ8NEB7 543 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 SLC35B2Q8TB61 432 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 ABHD17AQ96GS6 310 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 RBSNQ9H1K0 784 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 LATS2Q9NRM7 1088 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 FGF21Q9NSA1 209 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 NLE1Q9NVX2 485 aaPredicted RBP16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 ZDHHC3Q9NYG2 299 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 AMFRQ9UKV5 643 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 BTRCQ9Y297 605 aa16.78■□□□□ 0.28
VPS9D1-203ENST00000563798 UBA6A0AVT1 1052 aaPredicted RBP16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 GOLGA6L9A6NEM1 432 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 MATN2O00339 956 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 CREG1O75629 220 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 GSTM1P09488 218 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 EBLN1P0CF75 366 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 CD151P48509 253 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 TUBB4BP68371 445 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 GSTM4Q03013 218 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 RPA4Q13156 261 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 DNASE1L3Q13609 305 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 TUBB2AQ13885 445 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 SEPT6Q14141 434 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 SPARCL1Q14515 664 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 KCNAB1Q14722 419 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 ATP1A1-AS1Q5TC04 95 aa16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 DUS1LQ6P1R4 473 aaKnown RBP16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 ZNF517Q6ZMY9 492 aaPredicted RBP16.77■□□□□ 0.28
VPS9D1-203ENST00000563798 PEX26Q7Z412 305 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms