RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 MSL3P1P0C860 447 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 PYGMP11217 842 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 HLA-DPA1P20036 260 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 MSH3P20585 1137 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 CA5AP35218 305 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 RORAP35398 523 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 KPNA2P52292 529 aaKnown RBP18.19■□□□□ 0.5
NME3-204ENST00000563498 WASHC5Q12768 1159 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 ASTE1Q2TB18 679 aaPredicted RBP18.19■□□□□ 0.5
NME3-204ENST00000563498 FNBP1LQ5T0N5 605 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 B4GALNT4Q76KP1 1039 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 GLT6D1Q7Z4J2 308 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 TMEM102Q8N9M5 508 aaPredicted RBP18.19■□□□□ 0.5
NME3-204ENST00000563498 Q8NA96 180 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 GLIS1Q8NBF1 620 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 FDCSPQ8NFU4 85 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 OR2L2Q8NH16 312 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 SLC35G2Q8TBE7 412 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 TFB1MQ8WVM0 346 aaKnown RBP18.19■□□□□ 0.5
NME3-204ENST00000563498 PNPLA2Q96AD5 504 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 MRGPRX2Q96LB1 330 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 C12orf66Q96MD2 445 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 WWP1Q9H0M0 922 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 SLAMF7Q9NQ25 335 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 SOHLH2Q9NX45 425 aa18.19■□□□□ 0.5
NME3-204ENST00000563498 MED13Q9UHV7 2174 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 MATN2O00339 956 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 SLC35G4P0C7Q5 338 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 RNF224P0DH78 156 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 NFKB1P19838 968 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 NDUFS1P28331 727 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 PBLDP30039 288 aaPredicted RBP18.18■□□□□ 0.5
NME3-204ENST00000563498 ANP32AP39687 249 aaKnown RBP18.18■□□□□ 0.5
NME3-204ENST00000563498 VAV2P52735 878 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 RRADP55042 308 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 DYNLT1P63172 113 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 ESPL1Q14674 2120 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 SLC1A5Q15758 541 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 ODF2Q5BJF6 829 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 DUS1LQ6P1R4 473 aaKnown RBP18.18■□□□□ 0.5
NME3-204ENST00000563498 MED25Q71SY5 747 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 SLC25A41Q8N5S1 370 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 BLOC1S5Q8TDH9 187 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 RNF25Q96BH1 459 aaPredicted RBP18.18■□□□□ 0.5
NME3-204ENST00000563498 LINC00615Q96LM1 132 aaPredicted RBP18.18■□□□□ 0.5
NME3-204ENST00000563498 FCRL5Q96RD9 977 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 VAT1Q99536 393 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 NUDT9Q9BW91 350 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 C1GALT1Q9NS00 363 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 DDX56Q9NY93 547 aaKnown RBP18.18■□□□□ 0.5
NME3-204ENST00000563498 POMT2Q9UKY4 750 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 COLEC10Q9Y6Z7 277 aa18.18■□□□□ 0.5
NME3-204ENST00000563498 CAPN1P07384 714 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 AKT1P31749 480 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 CHRNA4P43681 627 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 ITGA1P56199 1179 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 ABRQ12979 859 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 PRKAA1Q13131 559 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 TFDP2Q14188 446 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 TAZQ16635 292 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 BCL7AQ4VC05 210 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 PRR30Q53SZ7 412 aaPredicted RBP18.17■□□□□ 0.5
NME3-204ENST00000563498 SLC6A19Q695T7 634 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 LCN10Q6JVE6 187 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 SPDYE1Q8NFV5 336 aaPredicted RBP18.17■□□□□ 0.5
NME3-204ENST00000563498 ZNF398Q8TD17 642 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 CLIP3Q96DZ5 547 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 SMAD5Q99717 465 aaKnown RBP18.17■□□□□ 0.5
NME3-204ENST00000563498 DPH2Q9BQC3 489 aaPredicted RBP18.17■□□□□ 0.5
NME3-204ENST00000563498 TLR10Q9BXR5 811 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 GPR83Q9NYM4 423 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 HEBP2Q9Y5Z4 205 aa18.17■□□□□ 0.5
NME3-204ENST00000563498 PRRC2CQ9Y520 2896 aaKnown RBP18.16■□□□□ 0.5
NME3-204ENST00000563498 PRAMEF1O95521 474 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 SLC1A1P43005 524 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 ADCY2Q08462 1091 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 MPP3Q13368 585 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 EIF2S3LQ2VIR3 472 aaKnown RBP18.16■□□□□ 0.5
NME3-204ENST00000563498 ZNF789Q5FWF6 425 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 PRAMEF17Q5VTA0 474 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 FBXO38Q6PIJ6 1188 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 FAM198BQ6UWH4 519 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 MFSD7Q6UXD7 560 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 LUZP1Q86V48 1076 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 RHOT2Q8IXI1 618 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 SYTL1Q8IYJ3 562 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 RBMXL3Q8N7X1 1067 aaKnown RBP18.16■□□□□ 0.5
NME3-204ENST00000563498 OXNAD1Q96HP4 312 aaPredicted RBP18.16■□□□□ 0.5
NME3-204ENST00000563498 PPM1MQ96MI6 270 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 CCM2Q9BSQ5 444 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 ACTR5Q9H9F9 607 aaPredicted RBP18.16■□□□□ 0.5
NME3-204ENST00000563498 CASS4Q9NQ75 786 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 PCMTD2Q9NV79 361 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 C5AR2Q9P296 337 aa18.16■□□□□ 0.5
NME3-204ENST00000563498 KLHL8Q9P2G9 620 aaPredicted RBP18.16■□□□□ 0.5
NME3-204ENST00000563498 SAE1Q9UBE0 346 aaPredicted RBP18.16■□□□□ 0.5
NME3-204ENST00000563498 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.16■□□□□ 0.54e-11■■□□□ 14.2
NME3-204ENST00000563498 WIPF3A6NGB9 483 aa18.15■□□□□ 0.5
NME3-204ENST00000563498 SLC9B1P1A6NJY1 282 aa18.15■□□□□ 0.5
NME3-204ENST00000563498 ZNF185O15231 689 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms