RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 CDKL4Q5MAI5 379 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 EOGTQ5NDL2 527 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 PLEKHS1Q5SXH7 462 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 PIP5KL1Q5T9C9 394 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 NAIF1Q69YI7 327 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 KIAA1161Q6NSJ0 714 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 METTL2BQ6P1Q9 378 aaKnown RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 XKR5Q6UX68 686 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 GPSM1Q86YR5 675 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 CPNE9Q8IYJ1 553 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 FBXO39Q8N4B4 442 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SPATA6LQ8N4H0 392 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SLC44A3Q8N4M1 653 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 CLDN19Q8N6F1 224 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 TXNDC5Q8NBS9 432 aaKnown RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 EEF1AKMT1Q8WVE0 214 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SCAMP4Q969E2 229 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 ABHD17AQ96GS6 310 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 ACOX2Q99424 681 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 WRAP53Q9BUR4 548 aaKnown RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 RIOK2Q9BVS4 552 aaKnown RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 BOCQ9BWV1 1114 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 C1QTNF7Q9BXJ2 289 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 TMEM120AQ9BXJ8 343 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 ABCG8Q9H221 673 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 ACTR5Q9H9F9 607 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 DNAJC28Q9NX36 388 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 NUDT4Q9NZJ9 180 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 CD84Q9UIB8 345 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 ATXN7L1Q9ULK2 861 aaPredicted RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 SORCS3Q9UPU3 1222 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 DNAJC16Q9Y2G8 782 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 TNPO3Q9Y5L0 923 aaKnown RBP9.55□□□□□ -0.88
UBFD1-202ENST00000563366 FADS3Q9Y5Q0 445 aa9.55□□□□□ -0.88
UBFD1-202ENST00000563366 KLHL33A6NCF5 533 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 GIPC1O14908 333 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 MID1O15344 667 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 VEGFDO43915 354 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 CCDC22O60826 627 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 ATG13O75143 517 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 ATP5HO75947 161 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 TM7SF2O76062 418 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 RECQL5O94762 991 aaPredicted RBP9.54□□□□□ -0.88
UBFD1-202ENST00000563366 TSPAN12O95859 305 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 MPC1LP0DKB6 136 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 SRFP11831 508 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 TEAD1P28347 426 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 GPR1P46091 355 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 PGGT1BP53609 377 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 ALDH18A1P54886 795 aaKnown RBP9.54□□□□□ -0.88
UBFD1-202ENST00000563366 AQP5P55064 265 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 HNRNPH2P55795 449 aaKnown RBP9.54□□□□□ -0.88
UBFD1-202ENST00000563366 PLOD1Q02809 727 aaPredicted RBP9.54□□□□□ -0.88
UBFD1-202ENST00000563366 CNTN1Q12860 1018 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 GTF2H3Q13889 308 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 PON2Q15165 354 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 TSNQ15631 228 aaKnown RBP9.54□□□□□ -0.88
UBFD1-202ENST00000563366 RAET1GQ6H3X3 334 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 TTC23LQ6PF05 361 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 FRMD7Q6ZUT3 714 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 NEK10Q6ZWH5 1172 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 USP30Q70CQ3 517 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 SFTPA1Q8IWL2 248 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 HDDC3Q8N4P3 179 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 CHCHD4Q8N4Q1 142 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 CCNYL1Q8N7R7 359 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 PNPLA1Q8N8W4 532 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 IL17RCQ8NAC3 791 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 GIMAP7Q8NHV1 300 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 ASZ1Q8WWH4 475 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 CCT6BQ92526 530 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 FUBP1Q96AE4 644 aaKnown RBP9.54□□□□□ -0.88
UBFD1-202ENST00000563366 PTERQ96BW5 349 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 FAM136AQ96C01 138 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 SGF29Q96ES7 293 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 TMEM237Q96Q45 408 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 SORT1Q99523 831 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 TUBB6Q9BUF5 446 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 C1QTNF3Q9BXJ4 246 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 TRIM54Q9BYV2 358 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 RDH14Q9HBH5 336 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 FBRSL1Q9HCM7 1045 aaKnown RBP9.54□□□□□ -0.88
UBFD1-202ENST00000563366 PFDN4Q9NQP4 134 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 SLC2A4RGQ9NR83 387 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 HEBP1Q9NRV9 189 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 HCN2Q9UL51 889 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 FZD4Q9ULV1 537 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 ITM2BQ9Y287 266 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 NCKAP1Q9Y2A7 1128 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 C5orf42Q9H799 3197 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 BRWD1Q9NSI6 2320 aa9.54□□□□□ -0.88
UBFD1-202ENST00000563366 GOLGA8QA0A0J9YX86 632 aa9.53□□□□□ -0.88
UBFD1-202ENST00000563366 GOLGA8OA6NCC3 632 aa9.53□□□□□ -0.88
UBFD1-202ENST00000563366 NPEPPSL1A6NEC2 478 aa9.53□□□□□ -0.88
UBFD1-202ENST00000563366 TRPC5OSA6NMA1 111 aa9.53□□□□□ -0.88
UBFD1-202ENST00000563366 FADS2P1A8MWK0 482 aa9.53□□□□□ -0.88
UBFD1-202ENST00000563366 GPR89AB7ZAQ6 455 aa9.53□□□□□ -0.88
UBFD1-202ENST00000563366 GOLGA8NF8WBI6 632 aa9.53□□□□□ -0.88
UBFD1-202ENST00000563366 SLC16A5O15375 505 aa9.53□□□□□ -0.88
UBFD1-202ENST00000563366 HDAC3O15379 428 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms