RNA–Protein interactions for RNA: ENST00000563065.5

CCNDBP1-204, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-204ENST00000563065 IFT81Q8WYA0 676 aa17.09■□□□□ 0.33
CCNDBP1-204ENST00000563065 FAM136AQ96C01 138 aa17.09■□□□□ 0.33
CCNDBP1-204ENST00000563065 RMDN2Q96LZ7 410 aa17.09■□□□□ 0.33
CCNDBP1-204ENST00000563065 TCF12Q99081 682 aa17.09■□□□□ 0.33
CCNDBP1-204ENST00000563065 PPANQ9NQ55 473 aaKnown RBP17.09■□□□□ 0.33
CCNDBP1-204ENST00000563065 GALPQ9UBC7 116 aa17.09■□□□□ 0.33
CCNDBP1-204ENST00000563065 KLK13Q9UKR3 277 aa17.09■□□□□ 0.33
CCNDBP1-204ENST00000563065 FBXO5Q9UKT4 447 aa17.09■□□□□ 0.33
CCNDBP1-204ENST00000563065 ATXN7L1Q9ULK2 861 aaPredicted RBP17.09■□□□□ 0.33
CCNDBP1-204ENST00000563065 OR5K4A6NMS3 321 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 PIAS1O75925 651 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 FTH1P02794 183 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 RPLP0P05388 317 aaKnown RBP17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 XRCC1P18887 633 aaPredicted RBP17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 RPS3P23396 243 aaKnown RBP eCLIP17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 FASLGP48023 281 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 BOP1Q14137 746 aaKnown RBP17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 GLE1Q53GS7 698 aaKnown RBP17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 ZNF549Q6P9A3 640 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 CNSTQ6PJW8 725 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 ZNF438Q7Z4V0 828 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 PYROXD1Q8WU10 500 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 JPH3Q8WXH2 748 aaPredicted RBP17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 CERS2Q96G23 380 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 C9orf72Q96LT7 481 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 C12orf66Q96MD2 445 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 SCNM1Q9BWG6 230 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 OR52A5Q9H2C5 316 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 LRRN3Q9H3W5 708 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 VPS37BQ9H9H4 285 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 SARS2Q9NP81 518 aaKnown RBP17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 ACSL5Q9ULC5 683 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 UNC13CQ8NB66 2214 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 PTPRBP23467 1997 aa17.08■□□□□ 0.32
CCNDBP1-204ENST00000563065 QSOX1O00391 747 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 NIPSNAP2O75323 286 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 VIPP01282 170 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 RHOXF2BP0C7M4 288 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 SLC2A4P14672 509 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 PNLIPP16233 465 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 GABRB3P28472 473 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 SSTR1P30872 391 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 HALP42357 657 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 ABCG1P45844 678 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 TEDDM1Q5T9Z0 273 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 CAPRIN2Q6IMN6 1127 aaKnown RBP17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 USP53Q70EK8 1073 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 TMPRSS9Q7Z410 1059 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 VRK3Q8IV63 474 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 TRIM48Q8IWZ4 208 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 C2CD4AQ8NCU7 369 aaPredicted RBP17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 CXorf40BQ96DE9 158 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 SLC38A3Q99624 504 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 RHOXF2Q9BQY4 288 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 FAM167BQ9BTA0 163 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 TBC1D10AQ9BXI6 508 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 IMP3Q9NV31 184 aaKnown RBP17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 GNPTGQ9UJJ9 305 aa17.07■□□□□ 0.32
CCNDBP1-204ENST00000563065 KNTC1P50748 2209 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 SLC5A10A0PJK1 596 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 KLHL33A6NCF5 533 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 NTN3O00634 580 aaPredicted RBP17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 EIF3HO15372 352 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 MT-CO3P00414 261 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 SLC35G4P0C7Q5 338 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 AOAHP28039 575 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 CD1CP29017 333 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 GPX6P59796 221 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 HSPA14Q0VDF9 509 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 NR1D2Q14995 579 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 RNF187Q5TA31 235 aaPredicted RBP17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 CDCP2Q5VXM1 449 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 TMPRSS7Q7RTY8 843 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 LRRC6Q86X45 466 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 PALM2Q8IXS6 379 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 PHC3Q8NDX5 983 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 CALML6Q8TD86 181 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 NRTNQ99748 197 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 RDH14Q9HBH5 336 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 SLC40A1Q9NP59 571 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 FAM114A2Q9NRY5 505 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 INTS10Q9NVR2 710 aaKnown RBP17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 KCNK4Q9NYG8 393 aa17.06■□□□□ 0.32
CCNDBP1-204ENST00000563065 IGHV1OR21-1A0A087WYE8 117 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 LIN7AO14910 233 aaPredicted RBP17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 PFDN6O15212 129 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 AHSGP02765 367 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 MTHFD1P11586 935 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 CDK4P11802 303 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 JUPP14923 745 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 ECHS1P30084 290 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 MAGEA4P43358 317 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 MAPK9P45984 424 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 CFHR1Q03591 330 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 TARDBPQ13148 414 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 GPR18Q14330 331 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 TMEM26Q6ZUK4 368 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 CNTN4Q8IWV2 1026 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 GSDMBQ8TAX9 411 aa17.05■□□□□ 0.32
CCNDBP1-204ENST00000563065 SMYD2Q9NRG4 433 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms