RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 PRKAR2AP13861 404 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 TAGLNQ01995 201 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 IRF5Q13568 498 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 USP10Q14694 798 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 TXNDC11Q6PKC3 985 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 FBXL6Q8N531 539 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 PARP16Q8N5Y8 322 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 CCNYQ8ND76 341 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 ZNF555Q8NEP9 628 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 SNAPC3Q92966 411 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 ADAM2Q99965 735 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 SMURF2Q9HAU4 748 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 UCKL1Q9NWZ5 548 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 INTS6Q9UL03 887 aaKnown RBP13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 NOD1Q9Y239 953 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 NAALAD2Q9Y3Q0 740 aa13.85□□□□□ -0.19
GTF3C1-203ENST00000562609 A0A0A0MRY4 1105 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 NEMP2A6NFY4 417 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 SEPT4O43236 478 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 NPHS1O60500 1241 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ADAMTS4O75173 837 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 SEMA3DO95025 777 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 PCNAP12004 261 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 IFI30P13284 250 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 BDNFP23560 247 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 GGT5P36269 586 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ARL4AP40617 200 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 RPL34P49207 117 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 GSK3BP49841 420 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 TRAF3Q13114 568 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 KIAA1841Q6NSI8 718 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 BEND5Q7L4P6 421 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 MINDY1Q8N5J2 469 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 TXNDC5Q8NBS9 432 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 HTR3CQ8WXA8 447 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 AURKBQ96GD4 344 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 SPATA13Q96N96 652 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 QKIQ96PU8 341 aaKnown RBP eCLIP13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ASB2Q96Q27 587 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 AMBRA1Q9C0C7 1298 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 POMKQ9H5K3 350 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 RNF186Q9NXI6 227 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 FZD10Q9ULW2 581 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 A8MX80 341 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 SHOXO15266 292 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 AOC2O75106 756 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 CPNE3O75131 537 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 SCO1O75880 301 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 PRKD3O94806 890 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ARHGEF15O94989 841 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 PRKACAP17612 351 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 CAPN3P20807 821 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 SLC9A3P48764 834 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 TOP3AQ13472 1001 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ZNF460Q14592 562 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ACOX1Q15067 660 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 RABL3Q5HYI8 236 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ERAP2Q6P179 960 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 PNCKQ6P2M8 343 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 PIWIL4Q7Z3Z4 852 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 HORMAD1Q86X24 394 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 CENPLQ8N0S6 344 aaPredicted RBP13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 DNAJB14Q8TBM8 379 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 MCOLN3Q8TDD5 553 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 GTF2H4Q92759 462 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 GDF15Q99988 308 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 DCSTAMPQ9H295 470 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 MMP27Q9H306 513 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ALG2Q9H553 416 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 IARS2Q9NSE4 1012 aaKnown RBP13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ACOXLQ9NUZ1 547 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ERVK-18Q9QC07 812 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 SNX6Q9UNH7 406 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 ANKRD6Q9Y2G4 727 aa13.84□□□□□ -0.19
GTF3C1-203ENST00000562609 BBIP1A8MTZ0 92 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 UPK1AO00322 258 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 NOBOXO60393 691 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 YES1P07947 543 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 SLC35E2BP0CK96 405 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 DBTP11182 482 aaKnown RBP13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 CYP2A7P20853 494 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 PSMB4P28070 264 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 SREBF2Q12772 1141 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 UPP1Q16831 310 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 TPRG1LQ5T0D9 272 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 UBE2Q1Q7Z7E8 422 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 NOXA1Q86UR1 476 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 OR52K1Q8NGK4 314 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 RNF139Q8WU17 664 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 LRRC58Q96CX6 371 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 SLC39A13Q96H72 371 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 CCDC120Q96HB5 630 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 RNF170Q96K19 258 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 PIF1Q9H611 641 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 ANKHQ9HCJ1 492 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 CYP4F12Q9HCS2 524 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 TMLHEQ9NVH6 421 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 COQ3Q9NZJ6 369 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 NDUFAF1Q9Y375 327 aa13.83□□□□□ -0.19
GTF3C1-203ENST00000562609 RWDD3Q9Y3V2 267 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms