RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 RASGEF1BQ0VAM2 473 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 LRRC73Q5JTD7 316 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 UBAP2Q5T6F2 1119 aaKnown RBP11.11□□□□□ -0.63
RPAP1-204ENST00000562303 PHF19Q5T6S3 580 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 ALG1LQ6GMV1 187 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 TAC4Q86UU9 113 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 SLC35G5Q96KT7 338 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 RSL24D1Q9UHA3 163 aaKnown RBP11.11□□□□□ -0.63
RPAP1-204ENST00000562303 VSTM5A8MXK1 200 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 TEX46H3BTG2 121 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 GNB5O14775 395 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 BCKDKO14874 412 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 TGDSO95455 350 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 SERPINA3P01011 423 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 C8GP07360 202 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 CRHR1P34998 444 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 ACTR1BP42025 376 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 YAP1P46937 504 aaKnown RBP11.11□□□□□ -0.63
RPAP1-204ENST00000562303 NDST2P52849 883 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 ACTR1AP61163 376 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 CBX3Q13185 183 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 CCSAPQ6IQ19 270 aaPredicted RBP11.11□□□□□ -0.63
RPAP1-204ENST00000562303 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.11□□□□□ -0.63
RPAP1-204ENST00000562303 ANKFN1Q8N957 763 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 NSMCE3Q96MG7 304 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 DPEP3Q9H4B8 488 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 IL1RAPQ9NPH3 570 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 VWDEQ8N2E2 1590 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 MATN3O15232 486 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 TGFB1I1O43294 461 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 LYPLA2O95372 231 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 MT-CYBP00156 380 aaPredicted RBP11.11□□□□□ -0.63
RPAP1-204ENST00000562303 IL7RP16871 459 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 SMPD1P17405 629 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 PBX3P40426 434 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 MLLT3P42568 568 aaPredicted RBP11.11□□□□□ -0.63
RPAP1-204ENST00000562303 KHKP50053 298 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 AP1S2P56377 157 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 GBE1Q04446 702 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 CLEC6AQ6EIG7 209 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 ARHGAP22Q7Z5H3 698 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 SATL1Q86VE3 508 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 FUKQ8N0W3 1084 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 SPATA22Q8NHS9 363 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 MCFD2Q8NI22 146 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 INPP4AQ96PE3 977 aaPredicted RBP11.11□□□□□ -0.63
RPAP1-204ENST00000562303 DNAJC28Q9NX36 388 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 FKBPLQ9UIM3 349 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 SNX7Q9UNH6 387 aa11.11□□□□□ -0.63
RPAP1-204ENST00000562303 WBP11Q9Y2W2 641 aaKnown RBP11.11□□□□□ -0.63
RPAP1-204ENST00000562303 PRR5-ARHGAP8B1AHC4 643 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 PAPSS2O95340 614 aaPredicted RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 ARHGAP8P85298 464 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 POU5F1Q01860 360 aaKnown RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 UAP1L1Q3KQV9 507 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 TMEM63BQ5T3F8 832 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 RBM44Q6ZP01 1051 aaKnown RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 SAMD14Q8IZD0 417 aaPredicted RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 C2orf15Q8WU43 125 aaKnown RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 OVCA2Q8WZ82 227 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 RBM4BQ9BQ04 359 aaKnown RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 RBM4Q9BWF3 364 aaKnown RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 ANKHQ9HCJ1 492 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 SLCO1B3Q9NPD5 702 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 FAM155BO75949 473 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 AP2A1O95782 977 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 EOMESO95936 686 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 RPL5P46777 297 aaKnown RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 LIPEQ05469 1076 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 PUM1Q14671 1186 aaKnown RBP eCLIP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 ZNF311Q5JNZ3 666 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 BRSK1Q8TDC3 778 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 WFIKKN2Q8TEU8 576 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 AGAP11Q8TF27 550 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 RFKQ969G6 155 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 NUS1Q96E22 293 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 RAB11FIP5Q9BXF6 653 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 USP32Q8NFA0 1604 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 COL5A2P05997 1499 aaPredicted RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 E9PCH4 1651 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 LRRC10BA6NIK2 292 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 PLK4O00444 970 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 PDPK1O15530 556 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 NME6O75414 186 aaPredicted RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 CCNB2O95067 398 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 GSTT1P30711 240 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 CCNFP41002 786 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 DRG2P55039 364 aaKnown RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 IL17AQ16552 155 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 SLCO6A1Q86UG4 719 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 AMZ2Q86W34 360 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 LNX2Q8N448 690 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 VGLL2Q8N8G2 317 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 FAM110BQ8TC76 370 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 GAL3ST3Q96A11 431 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 PRICKLE1Q96MT3 831 aaPredicted RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 ARHGAP9Q9BRR9 750 aa11.1□□□□□ -0.63
RPAP1-204ENST00000562303 CARS2Q9HA77 564 aaKnown RBP11.1□□□□□ -0.63
RPAP1-204ENST00000562303 FANCFQ9NPI8 374 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms